C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00065E_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000062449-ENSDARG00000039456 CGP 7955 8:14761427-14958763
GeneTranscriptPositionBiotype
ENSDARG00000039456 (acbd6)
acyl-Coenzyme A binding domain containing 6
ENSDART00000057642 (acbd6-001) 14898223-14958763 protein_coding
ENSDART00000110151 (acbd6-201) 14898339-14958757 protein_coding
ENSDARG00000062449 (xpr1)
xenotropic and polytropic retrovirus receptor 1
ENSDART00000090306 (xpr1-001) 14761427-14892841 protein_coding
CIL_00065E_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026469-ENSMUSG00000033701 CGP 10090 1:155275701-155687233
GeneTranscriptPositionBiotype
ENSMUSG00000026469 (Xpr1)
xenotropic and polytropic retrovirus receptor 1
ENSMUST00000027741 (Xpr1-001) 155275701-155417309 protein_coding
ENSMUST00000111774 (Xpr1-002) 155282668-155417415 protein_coding
ENSMUST00000111775 (Xpr1-003) 155278982-155417407 protein_coding
ENSMUST00000129271 (Xpr1-004) 155322772-155417395 retained_intron
ENSMUST00000139925 (Xpr1-006) 155282183-155309642 retained_intron
ENSMUST00000143529 (Xpr1-005) 155384176-155384662 processed_transcript
ENSMUSG00000033701 (Acbd6)
acyl-Coenzyme A binding domain containing 6
ENSMUST00000035560 (Acbd6-001) 155558129-155687233 protein_coding
ENSMUST00000080138 (Acbd6-003) 155558120-155572288 protein_coding
ENSMUST00000097529 (Acbd6-002) 155558126-155587798 protein_coding
ENSMUST00000159339 (Acbd6-004) 155567248-155572259 retained_intron
ENSMUSG00000073535 (Gm5532)
predicted gene 5532
ENSMUST00000097531 (Gm5532-001) 155520173-155527111 lincRNA
ENSMUSG00000093286 (Gm22569)
predicted gene, 22569
ENSMUST00000175545 (Gm22569-201) 155315966-155316089 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00065E_0001ENSDARG00000039456ENSDART00000057642ENSDART00000110151ENSDARG00000062449ENSDART00000090306CIL_00065E_0002ENSMUSG00000026469ENSMUST00000027741ENSMUST00000111774ENSMUST00000111775ENSMUST00000129271ENSMUST00000139925ENSMUST00000143529ENSMUSG00000033701ENSMUST00000035560ENSMUST00000080138ENSMUST00000097529ENSMUST00000159339ENSMUSG00000073535ENSMUST00000097531ENSMUSG00000093286ENSMUST00000175545
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00065E_0001ENSDARG00000039456ENSDART00000057642ENSDART00000110151ENSDARG00000062449ENSDART00000090306CIL_00065E_0002ENSMUSG00000026469ENSMUST00000027741ENSMUST00000111774ENSMUST00000111775ENSMUSG00000033701ENSMUST00000035560ENSMUST00000080138ENSMUST00000097529ENSMUSG00000073535ENSMUST00000097531ENSMUSG00000093286ENSMUST00000175545
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000039456 ENSDART00000057642 N/A N/A N/A 11.909±5.65 N/A N/A 3.890±2.10 6.474±3.77 0.210±0.00 N/A 1.422±0.00 N/A N/A N/A
ENSDART00000110151 N/A N/A N/A 2.376±0.00 N/A N/A 1.118±0.37 1.614±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000062449 ENSDART00000090306 N/A N/A N/A 0.155±0.00 N/A N/A 2.344±0.00 N/A 0.085±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026469 ENSMUST00000027741 3.191±0.60 4.527±1.83 5.011±0.61 17.372±8.14 3.291±1.92 8.078±2.31 4.521±0.27 10.091±1.77 2.160±0.96 3.967±1.33 12.538±1.02 4.201±1.95 3.395±1.38 3.914±1.57
ENSMUST00000111774 2.330±0.56 3.691±1.12 N/A N/A 2.644±0.29 5.546±0.00 N/A 3.928±0.00 1.872±0.75 2.755±0.30 N/A 4.113±0.70 N/A 10.940±0.50
ENSMUST00000111775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.432±0.00 3.278±1.63
ENSMUST00000129271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000033701 ENSMUST00000035560 8.993±1.87 N/A 12.669±0.28 20.938±10.70 8.405±1.75 6.634±1.62 5.638±1.22 10.974±1.45 6.737±3.59 9.352±0.70 3.164±0.52 13.687±4.00 9.817±3.63 85.297±7.99
ENSMUST00000080138 22.508±7.23 103.478±14.57 26.332±7.68 21.470±9.63 44.513±30.35 46.650±3.35 11.460±5.71 27.282±9.76 19.668±5.83 30.510±13.67 21.424±2.18 70.988±29.03 13.606±4.18 N/A
ENSMUST00000097529 N/A N/A N/A N/A 1.317±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 22.218±3.74
ENSMUST00000159339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000073535 ENSMUST00000097531 0.088±0.02 1.447±0.32 0.076±0.00 0.081±0.04 0.270±0.15 0.101±0.04 12.175±4.33 0.096±0.07 0.083±0.09 0.835±0.08 0.448±0.11 0.460±0.29 0.236±0.33 0.079±0.04
ENSMUSG00000093286 ENSMUST00000175545 N/A N/A 51.673±0.00 6.142±0.00 N/A N/A N/A N/A 21.789±7.88 N/A N/A 9.400±0.00 N/A N/A

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