C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00065E_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000062449-ENSDARG00000039456 CGP 7955 8:14761427-14958763
GeneTranscriptPositionBiotype
ENSDARG00000039456 (acbd6)
acyl-Coenzyme A binding domain containing 6 		ENSDART00000057642 (acbd6-001) 14898223-14958763 protein_coding
ENSDART00000110151 (acbd6-201) 14898339-14958757 protein_coding
ENSDARG00000062449 (xpr1)
xenotropic and polytropic retrovirus receptor 1 		ENSDART00000090306 (xpr1-001) 14761427-14892841 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00065E_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026469-ENSMUSG00000033701 CGP 10090 1:155275701-155687233
GeneTranscriptPositionBiotype
ENSMUSG00000026469 (Xpr1)
xenotropic and polytropic retrovirus receptor 1 		ENSMUST00000027741 (Xpr1-001) 155275701-155417309 protein_coding
ENSMUST00000111774 (Xpr1-002) 155282668-155417415 protein_coding
ENSMUST00000111775 (Xpr1-003) 155278982-155417407 protein_coding
ENSMUST00000129271 (Xpr1-004) 155322772-155417395 retained_intron
ENSMUST00000139925 (Xpr1-006) 155282183-155309642 retained_intron
ENSMUST00000143529 (Xpr1-005) 155384176-155384662 processed_transcript
ENSMUSG00000033701 (Acbd6)
acyl-Coenzyme A binding domain containing 6 		ENSMUST00000035560 (Acbd6-001) 155558129-155687233 protein_coding
ENSMUST00000080138 (Acbd6-003) 155558120-155572288 protein_coding
ENSMUST00000097529 (Acbd6-002) 155558126-155587798 protein_coding
ENSMUST00000159339 (Acbd6-004) 155567248-155572259 retained_intron
ENSMUSG00000073535 (Gm5532)
predicted gene 5532 		ENSMUST00000097531 (Gm5532-001) 155520173-155527111 lincRNA
ENSMUSG00000093286 (Gm22569)
predicted gene, 22569 		ENSMUST00000175545 (Gm22569-201) 155315966-155316089 miRNA

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00065E_0001ENSDARG00000039456ENSDART00000057642ENSDART00000110151ENSDARG00000062449ENSDART00000090306CIL_00065E_0002ENSMUSG00000026469ENSMUST00000027741ENSMUST00000111774ENSMUST00000111775ENSMUST00000129271ENSMUST00000139925ENSMUST00000143529ENSMUSG00000033701ENSMUST00000035560ENSMUST00000080138ENSMUST00000097529ENSMUST00000159339ENSMUSG00000073535ENSMUST00000097531ENSMUSG00000093286ENSMUST00000175545
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00065E_0001ENSDARG00000039456ENSDART00000057642ENSDART00000110151ENSDARG00000062449ENSDART00000090306CIL_00065E_0002ENSMUSG00000026469ENSMUST00000027741ENSMUST00000111774ENSMUST00000111775ENSMUSG00000033701ENSMUST00000035560ENSMUST00000080138ENSMUST00000097529ENSMUSG00000073535ENSMUST00000097531ENSMUSG00000093286ENSMUST00000175545
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000039456 ENSDART00000057642 N/A N/A N/A 11.909±5.65 N/A N/A 3.890±2.10 6.474±3.77 0.210±0.00 N/A 1.422±0.00 N/A N/A N/A
ENSDART00000110151 N/A N/A N/A 2.376±0.00 N/A N/A 1.118±0.37 1.614±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000062449 ENSDART00000090306 N/A N/A N/A 0.155±0.00 N/A N/A 2.344±0.00 N/A 0.085±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026469 ENSMUST00000027741 3.191±0.60 4.527±1.83 5.011±0.61 17.372±8.14 3.291±1.92 8.078±2.31 4.521±0.27 10.091±1.77 2.160±0.96 3.967±1.33 12.538±1.02 4.201±1.95 3.395±1.38 3.914±1.57
ENSMUST00000111774 2.330±0.56 3.691±1.12 N/A N/A 2.644±0.29 5.546±0.00 N/A 3.928±0.00 1.872±0.75 2.755±0.30 N/A 4.113±0.70 N/A 10.940±0.50
ENSMUST00000111775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.432±0.00 3.278±1.63
ENSMUST00000129271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000033701 ENSMUST00000035560 8.993±1.87 N/A 12.669±0.28 20.938±10.70 8.405±1.75 6.634±1.62 5.638±1.22 10.974±1.45 6.737±3.59 9.352±0.70 3.164±0.52 13.687±4.00 9.817±3.63 85.297±7.99
ENSMUST00000080138 22.508±7.23 103.478±14.57 26.332±7.68 21.470±9.63 44.513±30.35 46.650±3.35 11.460±5.71 27.282±9.76 19.668±5.83 30.510±13.67 21.424±2.18 70.988±29.03 13.606±4.18 N/A
ENSMUST00000097529 N/A N/A N/A N/A 1.317±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 22.218±3.74
ENSMUST00000159339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000073535 ENSMUST00000097531 0.088±0.02 1.447±0.32 0.076±0.00 0.081±0.04 0.270±0.15 0.101±0.04 12.175±4.33 0.096±0.07 0.083±0.09 0.835±0.08 0.448±0.11 0.460±0.29 0.236±0.33 0.079±0.04
ENSMUSG00000093286 ENSMUST00000175545 N/A N/A 51.673±0.00 6.142±0.00 N/A N/A N/A N/A 21.789±7.88 N/A N/A 9.400±0.00 N/A N/A

Loading