C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sideroflexin 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033720 Sfxn5 10090 - 6:85213051-85333422 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000045846 Sfxn5-001 85213051-85333422 protein_coding
  ENSMUST00000059034 Sfxn5-003 85234380-85333419 protein_coding
  ENSMUST00000113787 Sfxn5-005 85318872-85332750 protein_coding
  ENSMUST00000113788 Sfxn5-002 85299083-85333422 protein_coding
  ENSMUST00000134392 Sfxn5-008 85229307-85264933 processed_transcript
  ENSMUST00000138489 Sfxn5-004 85299085-85320398 processed_transcript
  ENSMUST00000148179 Sfxn5-007 85268714-85333406 processed_transcript
  ENSMUST00000149362 Sfxn5-006 85294922-85333419 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045846ENSMUST00000059034ENSMUST00000113788ENSMUST00000149362
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045846 9.099±3.56 6.761±1.25 1.660±0.04 8.980±5.86 6.527±1.51 6.700±0.61 1.141±0.24 8.466±0.21 5.939±5.18 3.007±0.40 0.761±0.26 4.221±1.21 1.282±1.14 0.186±0.09
ENSMUST00000059034 5.323±1.55 N/A N/A N/A 6.363±1.15 3.025±0.12 0.952±0.13 6.386±1.11 4.548±2.49 1.391±0.00 0.783±0.00 2.589±0.50 N/A 0.299±0.10
ENSMUST00000113788 N/A 16.898±1.22 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149362 N/A N/A N/A N/A 10.626±0.00 7.388±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087O CIL_00087O_0002 VISTA 6:84864955-85466474
CIL_0008RW CIL_0008RW_0002 VISTA 6:84918005-85518946
CIL_0002DU CIL_0002DU_0003 CGP 6:85187438-85333422
CIL_0002DT CIL_0002DT_0003 CGP 6:85213051-85374634

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 ISA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0008324 IEA cation transmembrane transporter activity
GO:0015137 IEA citrate transmembrane transporter activity
GO:0015746 IEA citrate transport
GO:0016021 IEA integral component of membrane
GO:0055072 IEA iron ion homeostasis
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000026137 sfxn5b sideroflexin 5b protein_coding Danio_rerio
ENSDARG00000093515 sfxn5a sideroflexin 5a protein_coding Danio_rerio
ENSG00000144040 SFXN5 sideroflexin 5 protein_coding Homo_sapiens

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