C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sideroflexin 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000144040 SFXN5 9606 - 2:72942036-73075619 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000272433 SFXN5-001 72942036-73071836 protein_coding
  ENST00000410065 SFXN5-002 72945022-73071724 protein_coding
  ENST00000411783 SFXN5-003 72944864-73071673 protein_coding
  ENST00000416579 SFXN5-014 72973181-73071728 processed_transcript
  ENST00000442582 SFXN5-011 72998951-73071725 protein_coding
  ENST00000450185 SFXN5-006 72996512-73071709 nonsense_mediated_decay
  ENST00000461352 SFXN5-004 72942036-73059180 processed_transcript
  ENST00000463277 SFXN5-015 72968447-73020839 processed_transcript
  ENST00000464825 SFXN5-018 72988292-73044615 processed_transcript
  ENST00000472259 SFXN5-007 73049086-73071266 processed_transcript
  ENST00000474528 SFXN5-005 72942036-73059172 processed_transcript
  ENST00000475630 SFXN5-020 73022535-73070567 processed_transcript
  ENST00000479293 SFXN5-013 73019447-73071289 processed_transcript
  ENST00000482289 SFXN5-010 72944740-72988348 processed_transcript
  ENST00000482542 SFXN5-016 72961202-72994964 processed_transcript
  ENST00000484123 SFXN5-019 73053329-73071662 processed_transcript
  ENST00000485057 SFXN5-023 73020086-73075619 processed_transcript
  ENST00000487508 SFXN5-017 72998957-73059176 processed_transcript
  ENST00000488839 SFXN5-021 73058077-73059158 retained_intron
  ENST00000490056 SFXN5-008 72944740-72981234 processed_transcript
  ENST00000495208 SFXN5-009 72944603-72981117 processed_transcript
  ENST00000497144 SFXN5-022 73001527-73071330 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonKidneyLiverLungMuscleOvaryPlacentaENST00000272433ENST00000474528ENST00000490056ENST00000495208
Transcript ID Bladder Brain Colon Kidney Liver Lung Muscle Ovary Placenta
ENST00000272433 N/A 5.699±0.00 0.803±0.00 8.098±0.09 2.466±1.77 N/A 0.144±0.00 3.544±0.00 1.616±0.00
ENST00000474528 N/A 15.588±7.90 N/A N/A N/A 0.624±0.00 N/A N/A 2.982±0.00
ENST00000490056 6.878±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495208 N/A N/A N/A N/A N/A N/A 1.125±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087O CIL_00087O_0001 VISTA 2:72597601-73198962
CIL_0008RW CIL_0008RW_0001 VISTA 2:72647671-73248640
CIL_0002DU CIL_0002DU_0002 CGP 2:72916260-73075619
CIL_0002DT CIL_0002DT_0002 CGP 2:72942036-73156721

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0006811 IEA ion transport
GO:0008324 IEA cation transmembrane transporter activity
GO:0015075 IEA ion transmembrane transporter activity
GO:0015137 IEA citrate transmembrane transporter activity
GO:0015746 IEA citrate transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0055072 IEA iron ion homeostasis
GO:0055085 IEA transmembrane transport
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000026137 sfxn5b sideroflexin 5b protein_coding Danio_rerio
ENSDARG00000093515 sfxn5a sideroflexin 5a protein_coding Danio_rerio
ENSMUSG00000033720 Sfxn5 sideroflexin 5 protein_coding Mus_musculus

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