C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neurexin II
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033768 Nrxn2 10090 + 19:6418731-6544169 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000077182 Nrxn2-201 6418738-6533216 protein_coding
  ENSMUST00000113458 Nrxn2-004 6497828-6533217 protein_coding
  ENSMUST00000113459 Nrxn2-003 6497835-6544169 protein_coding
  ENSMUST00000113461 Nrxn2-008 6418765-6532278 protein_coding
  ENSMUST00000113462 Nrxn2-001 6418731-6533217 protein_coding
  ENSMUST00000124815 Nrxn2-011 6446298-6473451 processed_transcript
  ENSMUST00000128272 Nrxn2-002 6418738-6466750 retained_intron
  ENSMUST00000137166 Nrxn2-013 6427937-6533217 protein_coding
  ENSMUST00000137821 Nrxn2-012 6428646-6472380 protein_coding
  ENSMUST00000140435 Nrxn2-006 6473109-6482696 retained_intron
  ENSMUST00000148391 Nrxn2-009 6497671-6509865 processed_transcript
  ENSMUST00000150792 Nrxn2-005 6454571-6482697 retained_intron
  ENSMUST00000154580 Nrxn2-010 6517205-6532296 processed_transcript
  ENSMUST00000155158 Nrxn2-014 6428767-6473339 protein_coding
  ENSMUST00000157014 Nrxn2-007 6445460-6473353 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000077182ENSMUST00000113458ENSMUST00000113459ENSMUST00000113461ENSMUST00000113462ENSMUST00000128272ENSMUST00000137166ENSMUST00000140435ENSMUST00000148391ENSMUST00000150792ENSMUST00000154580
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000077182 N/A N/A N/A 12.590±2.67 N/A N/A N/A N/A N/A N/A N/A 0.029±0.00 N/A
ENSMUST00000113458 1.340±0.55 2.807±0.45 0.358±0.06 25.662±14.14 0.239±0.00 0.904±0.19 0.368±0.04 0.158±0.07 1.485±0.65 0.261±0.11 1.169±0.52 0.090±0.03 N/A
ENSMUST00000113459 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.168±0.00 N/A N/A N/A
ENSMUST00000113461 N/A N/A N/A 18.843±6.34 0.122±0.00 0.435±0.12 N/A 0.054±0.00 N/A N/A N/A 0.081±0.03 N/A
ENSMUST00000113462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.307±0.00
ENSMUST00000128272 N/A N/A N/A N/A 0.040±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137166 N/A N/A N/A 5.147±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.044±0.00
ENSMUST00000140435 N/A N/A N/A N/A 0.166±0.12 N/A N/A 0.278±0.04 2.193±0.59 N/A N/A 0.269±0.08 N/A
ENSMUST00000148391 N/A N/A N/A N/A N/A N/A 1.019±0.00 0.540±0.00 N/A N/A N/A N/A N/A
ENSMUST00000150792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.173±0.00 N/A
ENSMUST00000154580 3.317±1.94 N/A N/A 85.620±0.00 1.551±0.09 N/A 1.816±0.51 0.940±0.23 13.324±0.76 0.752±0.00 4.422±1.38 1.961±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005246 IGI calcium channel regulator activity
GO:0005515 IPI protein binding
GO:0007268 IGI synaptic transmission
GO:0007269 IGI neurotransmitter secretion
GO:0007416 IGI synapse assembly
GO:0016021 IEA integral component of membrane
GO:0030534 IEA adult behavior
GO:0035176 IEA social behavior
GO:0042297 IEA vocal learning
GO:0042734 ISA presynaptic membrane
GO:0046872 IEA metal ion binding
GO:0071625 IEA vocalization behavior

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061454 nrxn2a neurexin 2a protein_coding Danio_rerio
ENSDARG00000063606 NRXN2 (2 of 2) neurexin 2 protein_coding Danio_rerio
ENSG00000110076 NRXN2 neurexin 2 protein_coding Homo_sapiens

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