C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neurexin II
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113458 Nrxn2-004 ENSMUSG00000033768 10090 + 19:6497828-6533217 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaENSMUST00000113458
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta
ENSMUST00000113458 1.340±0.55 2.807±0.45 0.358±0.06 25.662±14.14 0.239±0.00 0.904±0.19 0.368±0.04 0.158±0.07 1.485±0.65 0.261±0.11 1.169±0.52 0.090±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005246 IGI calcium channel regulator activity
GO:0005515 IPI protein binding
GO:0007268 IGI synaptic transmission
GO:0007269 IGI neurotransmitter secretion
GO:0007416 IGI synapse assembly
GO:0016021 IEA integral component of membrane
GO:0042734 ISA presynaptic membrane
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000091955 nrxn2b-201 protein_coding Danio_rerio 0 283
ENST00000265459 NRXN2-201 protein_coding Homo_sapiens 0 2841
ENST00000301894 NRXN2-003 protein_coding Homo_sapiens 0 3496
ENST00000377551 NRXN2-001 protein_coding Homo_sapiens 0 2841
ENST00000377559 NRXN2-002 protein_coding Homo_sapiens 0 2222
ENST00000401669 NRXN1-003 protein_coding Homo_sapiens 0 302
ENST00000404971 NRXN1-002 protein_coding Homo_sapiens 0 302
ENST00000405472 NRXN1-010 protein_coding Homo_sapiens 0 302
ENST00000409571 NRXN2-015 protein_coding Homo_sapiens 0 2841
ENST00000423049 NRXN2-006 protein_coding Homo_sapiens 0 699
ENST00000464307 NRXN2-005 retained_intron Homo_sapiens 0 2224
ENST00000475737 NRXN2-004 processed_transcript Homo_sapiens 0 582
ENST00000487484 NRXN2-008 processed_transcript Homo_sapiens 0 459

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