C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neurexin II
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113461 Nrxn2-008 ENSMUSG00000033768 10090 + 19:6418765-6532278 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLiverPlacentaENSMUST00000113461
Transcript ID Brain Breast Colon Liver Placenta
ENSMUST00000113461 18.843±6.34 0.122±0.00 0.435±0.12 0.054±0.00 0.081±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005246 IGI calcium channel regulator activity
GO:0005515 IPI protein binding
GO:0007268 IGI synaptic transmission
GO:0007269 IGI neurotransmitter secretion
GO:0007416 IGI synapse assembly
GO:0016021 IEA integral component of membrane
GO:0042734 ISA presynaptic membrane
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000131050 NRXN2 (2 of 2)-201 protein_coding Danio_rerio 0 606
ENSDART00000091955 nrxn2b-201 protein_coding Danio_rerio 0 283
ENST00000265459 NRXN2-201 protein_coding Homo_sapiens 0 1986
ENST00000301894 NRXN2-003 protein_coding Homo_sapiens 0 1986
ENST00000335750 NRXN3-201 protein_coding Homo_sapiens 0 403
ENST00000377551 NRXN2-001 protein_coding Homo_sapiens 0 1986
ENST00000377559 NRXN2-002 protein_coding Homo_sapiens 0 7354
ENST00000409571 NRXN2-015 protein_coding Homo_sapiens 0 2084
ENST00000417749 NRXN2-012 protein_coding Homo_sapiens 0 682
ENST00000423049 NRXN2-006 protein_coding Homo_sapiens 0 948
ENST00000437746 NRXN2-013 protein_coding Homo_sapiens 0 592
ENST00000442300 NRXN2-011 protein_coding Homo_sapiens 0 983
ENST00000464307 NRXN2-005 retained_intron Homo_sapiens 0 1986
ENST00000466324 NRXN2-014 retained_intron Homo_sapiens 0 1225
ENST00000475737 NRXN2-004 processed_transcript Homo_sapiens 0 555
ENST00000486057 NRXN2-009 processed_transcript Homo_sapiens 0 695
ENST00000496291 NRXN2-010 processed_transcript Homo_sapiens 0 577
ENST00000554719 NRXN3-001 protein_coding Homo_sapiens 0 403
ENST00000554738 NRXN3-002 nonsense_mediated_decay Homo_sapiens 0 832
ENST00000556496 NRXN3-003 retained_intron Homo_sapiens 0 767

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