C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein phosphatase 1, regulatory (inhibitor) subunit 16A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033819 Ppp1r16a 10090 + 15:76671615-76694919 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000037551 Ppp1r16a-001 76671615-76694919 protein_coding
  ENSMUST00000127674 Ppp1r16a-002 76690407-76694919 retained_intron
  ENSMUST00000129396 Ppp1r16a-010 76691691-76692493 retained_intron
  ENSMUST00000134449 Ppp1r16a-004 76692808-76694919 retained_intron
  ENSMUST00000135388 Ppp1r16a-006 76671647-76690809 processed_transcript
  ENSMUST00000138951 Ppp1r16a-007 76689181-76690356 processed_transcript
  ENSMUST00000140730 Ppp1r16a-005 76692917-76694919 retained_intron
  ENSMUST00000143274 Ppp1r16a-008 76691433-76693349 retained_intron
  ENSMUST00000150399 Ppp1r16a-003 76690529-76694915 nonsense_mediated_decay
  ENSMUST00000156920 Ppp1r16a-009 76691448-76693513 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037551ENSMUST00000127674ENSMUST00000134449ENSMUST00000135388ENSMUST00000140730ENSMUST00000150399ENSMUST00000156920
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037551 15.175±1.12 16.823±3.79 13.678±2.73 30.918±10.22 17.788±1.18 20.816±3.12 5.963±1.39 19.183±3.71 8.108±3.23 32.998±2.19 6.407±1.44 17.789±7.41 6.121±1.16 22.457±1.06
ENSMUST00000127674 N/A 7.909±3.26 N/A N/A 4.244±0.49 8.300±2.68 N/A 5.200±0.00 2.900±0.00 N/A N/A 8.565±1.17 4.012±1.15 6.006±0.00
ENSMUST00000134449 N/A N/A N/A N/A N/A 9.386±0.38 N/A N/A 4.289±1.06 N/A N/A 11.313±0.00 N/A N/A
ENSMUST00000135388 N/A N/A N/A N/A 4.012±0.00 N/A N/A N/A N/A N/A N/A 5.509±0.00 3.733±0.00 21.450±6.37
ENSMUST00000140730 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.414±0.00 N/A N/A
ENSMUST00000150399 N/A 7.397±1.41 N/A N/A N/A 5.464±0.00 N/A N/A N/A N/A N/A N/A 2.807±0.00 N/A
ENSMUST00000156920 15.837±0.13 20.399±0.00 N/A 33.983±0.00 3.729±0.00 23.971±0.00 6.840±0.55 N/A 10.216±0.08 N/A N/A 20.711±7.15 11.649±0.00 21.658±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SS CIL_0007SS_0002 VISTA 15:76102685-76704351
CIL_00064G CIL_00064G_0003 CGP 15:76668284-76694919
CIL_0000W0 CIL_0000W0_0002 CGP 15:76671615-76699674

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005829 TAS cytosol
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076980 PPP1R16A protein phosphatase 1, regulatory subunit 16A protein_coding Danio_rerio
ENSG00000160972 PPP1R16A protein phosphatase 1, regulatory subunit 16A protein_coding Homo_sapiens

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