C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000W0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000160972-ENSG00000167701 CGP 9606 8:144477969-144507174
GeneTranscriptPositionBiotype
ENSG00000167701 (GPT)
glutamic-pyruvate transaminase (alanine aminotransferase) 		ENST00000354769 (GPT-005) 144504140-144504936 retained_intron
ENST00000394955 (GPT-201) 144504082-144507171 protein_coding
ENST00000527165 (GPT-003) 144503737-144506405 retained_intron
ENST00000527961 (GPT-007) 144504221-144505139 retained_intron
ENST00000528431 (GPT-001) 144502973-144507174 protein_coding
ENST00000531330 (GPT-006) 144504140-144504836 retained_intron
ENST00000534702 (GPT-004) 144504140-144506125 retained_intron

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0000W0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033819-ENSMUSG00000022546 CGP 10090 15:76671615-76699674
GeneTranscriptPositionBiotype
ENSMUSG00000022546 (Gpt)
glutamic pyruvic transaminase, soluble 		ENSMUST00000023203 (Gpt-201) 76696764-76699674 protein_coding
ENSMUSG00000033819 (Ppp1r16a)
protein phosphatase 1, regulatory (inhibitor) subunit 16A 		ENSMUST00000037551 (Ppp1r16a-001) 76671615-76694919 protein_coding
ENSMUST00000127674 (Ppp1r16a-002) 76690407-76694919 retained_intron
ENSMUST00000129396 (Ppp1r16a-010) 76691691-76692493 retained_intron
ENSMUST00000134449 (Ppp1r16a-004) 76692808-76694919 retained_intron
ENSMUST00000135388 (Ppp1r16a-006) 76671647-76690809 processed_transcript
ENSMUST00000138951 (Ppp1r16a-007) 76689181-76690356 processed_transcript
ENSMUST00000140730 (Ppp1r16a-005) 76692917-76694919 retained_intron
ENSMUST00000143274 (Ppp1r16a-008) 76691433-76693349 retained_intron
ENSMUST00000150399 (Ppp1r16a-003) 76690529-76694915 nonsense_mediated_decay
ENSMUST00000156920 (Ppp1r16a-009) 76691448-76693513 nonsense_mediated_decay

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000W0_0001ENSG00000167701ENST00000354769ENST00000394955ENST00000527165ENST00000527961ENST00000528431ENST00000531330ENST00000534702CIL_0000W0_0002ENSMUSG00000022546ENSMUST00000023203ENSMUSG00000033819ENSMUST00000037551ENSMUST00000127674ENSMUST00000129396ENSMUST00000134449ENSMUST00000135388ENSMUST00000138951ENSMUST00000140730ENSMUST00000143274ENSMUST00000150399ENSMUST00000156920
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000W0_0001ENSG00000167701ENST00000354769ENST00000394955ENST00000527165ENST00000527961ENST00000528431ENST00000534702CIL_0000W0_0002ENSMUSG00000022546ENSMUST00000023203ENSMUSG00000033819ENSMUST00000037551ENSMUST00000127674ENSMUST00000134449ENSMUST00000135388ENSMUST00000140730ENSMUST00000150399ENSMUST00000156920
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000167701 ENST00000354769 N/A N/A N/A N/A N/A N/A N/A 17.649±0.00 N/A N/A N/A N/A N/A N/A
ENST00000394955 N/A N/A N/A N/A N/A 1.617±0.00 8.414±0.00 11.230±0.00 19.943±0.00 N/A 2.215±0.33 N/A N/A N/A
ENST00000527165 N/A N/A N/A N/A 0.566±0.00 N/A 1.258±0.00 6.750±0.00 N/A N/A N/A N/A N/A N/A
ENST00000527961 N/A N/A 2.190±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528431 3.302±0.00 N/A N/A N/A 9.569±0.00 2.417±0.00 N/A 6.004±0.00 21.100±0.00 N/A 3.706±0.00 N/A N/A N/A
ENST00000531330 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534702 N/A N/A N/A N/A N/A 2.494±0.00 N/A N/A N/A 0.420±0.00 4.552±0.00 0.999±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022546 ENSMUST00000023203 89.546±47.20 16.696±2.96 24.422±3.03 5.347±2.56 45.308±16.12 18.806±4.22 8.627±2.38 6.439±1.47 74.154±72.48 21.076±5.28 6.083±1.71 6.732±3.17 0.897±0.42 0.805±0.31
ENSMUSG00000033819 ENSMUST00000037551 15.175±1.12 16.823±3.79 13.678±2.73 30.918±10.22 17.788±1.18 20.816±3.12 5.963±1.39 19.183±3.71 8.108±3.23 32.998±2.19 6.407±1.44 17.789±7.41 6.121±1.16 22.457±1.06
ENSMUST00000127674 N/A 7.909±3.26 N/A N/A 4.244±0.49 8.300±2.68 N/A 5.200±0.00 2.900±0.00 N/A N/A 8.565±1.17 4.012±1.15 6.006±0.00
ENSMUST00000129396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134449 N/A N/A N/A N/A N/A 9.386±0.38 N/A N/A 4.289±1.06 N/A N/A 11.313±0.00 N/A N/A
ENSMUST00000135388 N/A N/A N/A N/A 4.012±0.00 N/A N/A N/A N/A N/A N/A 5.509±0.00 3.733±0.00 21.450±6.37
ENSMUST00000138951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140730 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.414±0.00 N/A N/A
ENSMUST00000143274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150399 N/A 7.397±1.41 N/A N/A N/A 5.464±0.00 N/A N/A N/A N/A N/A N/A 2.807±0.00 N/A
ENSMUST00000156920 15.837±0.13 20.399±0.00 N/A 33.983±0.00 3.729±0.00 23.971±0.00 6.840±0.55 N/A 10.216±0.08 N/A N/A 20.711±7.15 11.649±0.00 21.658±0.00

Loading