C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, regulatory (inhibitor) subunit 16A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000037551 Ppp1r16a-001 ENSMUSG00000033819 10090 + 15:76671615-76694919 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037551
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037551 15.175±1.12 16.823±3.79 13.678±2.73 30.918±10.22 17.788±1.18 20.816±3.12 5.963±1.39 19.183±3.71 8.108±3.23 32.998±2.19 6.407±1.44 17.789±7.41 6.121±1.16 22.457±1.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SS CIL_0007SS_0002 VISTA 15:76102685-76704351
CIL_00064G CIL_00064G_0003 CGP 15:76668284-76694919
CIL_0000W0 CIL_0000W0_0002 CGP 15:76671615-76699674

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005829 TAS cytosol
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000292539 PPP1R16A-001 protein_coding Homo_sapiens 0 1415
ENST00000435887 PPP1R16A-201 protein_coding Homo_sapiens 0 1415
ENST00000526183 PPP1R16A-002 retained_intron Homo_sapiens 0 230
ENST00000529009 PPP1R16A-005 protein_coding Homo_sapiens 0 239

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