C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lectin, galactoside-binding, soluble, 3 binding protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033880 Lgals3bp 10090 - 11:118392751-118402092 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000043722 Lgals3bp-001 118392751-118402092 protein_coding
  ENSMUST00000106290 Lgals3bp-005 118396607-118401852 protein_coding
  ENSMUST00000127054 Lgals3bp-004 118399761-118401038 protein_coding
  ENSMUST00000141459 Lgals3bp-002 118396809-118401872 processed_transcript
  ENSMUST00000144529 Lgals3bp-003 118392751-118398151 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043722ENSMUST00000106290ENSMUST00000144529
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043722 98.314±54.27 121.708±8.15 50.202±2.55 1.641±0.21 149.079±22.31 85.329±5.55 16.587±2.26 56.946±4.84 36.008±10.82 58.133±12.17 4.821±0.88 82.189±27.32 31.641±26.33 2.046±1.09
ENSMUST00000106290 N/A N/A N/A 2.781±0.00 N/A N/A N/A N/A N/A N/A N/A 26.130±0.00 19.261±13.66 0.540±0.00
ENSMUST00000144529 84.746±30.05 N/A 26.408±0.00 N/A 150.532±78.39 46.920±5.48 11.651±3.54 45.943±4.88 27.190±9.36 46.990±0.11 N/A 57.082±10.50 23.603±20.21 4.117±0.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00062K CIL_00062K_0002 CGP 11:118332360-118402092
CIL_0003UB CIL_0003UB_0003 CGP 11:118392751-118419086

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005044 ISS scavenger receptor activity
GO:0005515 IPI protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IEA extracellular space
GO:0006898 IEA receptor-mediated endocytosis
GO:0007155 IEA cell adhesion
GO:0016020 IEA membrane
GO:0031012 IEA extracellular matrix
GO:0070062 IEA extracellular vesicular exosome
GO:0072562 IEA blood microparticle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037805 lgals3bpa lectin, galactoside-binding, soluble, 3 binding protein a protein_coding Danio_rerio
ENSDARG00000040528 lgals3bpb lectin, galactoside-binding, soluble, 3 binding protein b protein_coding Danio_rerio
ENSDARG00000076848 LGALS3BP (3 of 3) lectin, galactoside-binding, soluble, 3 binding protein protein_coding Danio_rerio
ENSG00000108679 LGALS3BP lectin, galactoside-binding, soluble, 3 binding protein protein_coding Homo_sapiens

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