C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00062K_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000178404-ENSG00000108679 CGP 9606 17:78870910-78980109
GeneTranscriptPositionBiotype
ENSG00000035862 (TIMP2)
TIMP metallopeptidase inhibitor 2 		ENST00000262768 (TIMP2-001) 78852977-78925387 protein_coding
ENST00000536189 (TIMP2-003) 78852977-78922401 protein_coding
ENST00000585421 (TIMP2-008) 78852977-78874150 protein_coding
ENST00000586057 (TIMP2-004) 78852981-78874089 protein_coding
ENST00000592761 (TIMP2-002) 78855542-78874136 nonsense_mediated_decay
ENSG00000108679 (LGALS3BP)
lectin, galactoside-binding, soluble, 3 binding protein 		ENST00000262776 (LGALS3BP-001) 78971238-78980109 protein_coding
ENST00000585407 (LGALS3BP-021) 78972798-78979935 protein_coding
ENST00000586300 (LGALS3BP-012) 78976825-78979875 retained_intron
ENST00000586720 (LGALS3BP-004) 78971285-78979908 nonsense_mediated_decay
ENST00000587251 (LGALS3BP-002) 78971331-78979923 nonsense_mediated_decay
ENST00000587310 (LGALS3BP-009) 78973000-78979911 nonsense_mediated_decay
ENST00000587311 (LGALS3BP-003) 78971256-78979923 nonsense_mediated_decay
ENST00000588198 (LGALS3BP-005) 78972470-78979947 nonsense_mediated_decay
ENST00000588205 (LGALS3BP-019) 78973188-78977216 nonsense_mediated_decay
ENST00000588508 (LGALS3BP-014) 78972386-78974997 retained_intron
ENST00000588587 (LGALS3BP-013) 78972648-78976156 retained_intron
ENST00000588899 (LGALS3BP-011) 78974632-78979891 nonsense_mediated_decay
ENST00000588990 (LGALS3BP-006) 78974631-78979927 nonsense_mediated_decay
ENST00000589527 (LGALS3BP-020) 78972557-78977323 protein_coding
ENST00000589775 (LGALS3BP-018) 78972970-78979923 protein_coding
ENST00000589906 (LGALS3BP-010) 78972975-78979908 protein_coding
ENST00000591274 (LGALS3BP-017) 78974798-78979843 protein_coding
ENST00000591778 (LGALS3BP-007) 78971238-78979918 protein_coding
ENST00000592255 (LGALS3BP-016) 78972769-78974796 retained_intron
ENSG00000267491 (CTD-2373H9.5)
 ENST00000591108 (CTD-2373H9.5-001) 78903263-78905024 antisense
ENSG00000279339 (CTD-2373H9.3)
 ENST00000625199 (CTD-2373H9.3-001) 78897264-78900152 TEC
CIL_00062K_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000076433-ENSMUSG00000033880 CGP 10090 11:118332360-118402092
GeneTranscriptPositionBiotype
ENSMUSG00000017466 (Timp2)
tissue inhibitor of metalloproteinase 2 		ENSMUST00000017610 (Timp2-001) 118301069-118355506 protein_coding
ENSMUST00000155707 (Timp2-002) 118303701-118355740 protein_coding
ENSMUSG00000033880 (Lgals3bp)
lectin, galactoside-binding, soluble, 3 binding protein 		ENSMUST00000043722 (Lgals3bp-001) 118392751-118402092 protein_coding
ENSMUST00000106290 (Lgals3bp-005) 118396607-118401852 protein_coding
ENSMUST00000127054 (Lgals3bp-004) 118399761-118401038 protein_coding
ENSMUST00000141459 (Lgals3bp-002) 118396809-118401872 processed_transcript
ENSMUST00000144529 (Lgals3bp-003) 118392751-118398151 protein_coding
ENSMUSG00000076433 (BC100451)
cDNA sequence BC100451 		ENSMUST00000103024 (BC100451-001) 118332360-118342500 protein_coding
ENSMUST00000168100 (BC100451-201) 118332415-118334016 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00062K_0001ENSG00000035862ENST00000262768ENST00000536189ENST00000585421ENST00000586057ENST00000592761ENSG00000108679ENST00000262776ENST00000585407ENST00000586300ENST00000586720ENST00000587251ENST00000587310ENST00000587311ENST00000588198ENST00000588205ENST00000588508ENST00000588587ENST00000588899ENST00000588990ENST00000589527ENST00000589775ENST00000589906ENST00000591274ENST00000591778ENST00000592255ENSG00000267491ENST00000591108ENSG00000279339ENST00000625199CIL_00062K_0002ENSMUSG00000017466ENSMUST00000017610ENSMUST00000155707ENSMUSG00000033880ENSMUST00000043722ENSMUST00000106290ENSMUST00000127054ENSMUST00000141459ENSMUST00000144529ENSMUSG00000076433ENSMUST00000103024ENSMUST00000168100
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00062K_0001ENSG00000035862ENST00000262768ENST00000585421ENST00000586057ENSG00000108679ENST00000262776ENST00000585407ENST00000586720ENST00000587251ENST00000587311ENST00000591778ENSG00000267491ENST00000591108ENSG00000279339ENST00000625199CIL_00062K_0002ENSMUSG00000017466ENSMUST00000017610ENSMUST00000155707ENSMUSG00000033880ENSMUST00000043722ENSMUST00000106290ENSMUST00000144529ENSMUSG00000076433ENSMUST00000103024ENSMUST00000168100
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000035862 ENST00000262768 121.362±0.00 48.078±0.00 2.877±0.00 21.561±15.67 84.036±52.92 72.388±59.79 24.612±22.04 19.508±18.70 16.977±1.90 88.396±77.42 30.619±0.00 138.046±115.27 292.525±94.85 106.522±39.24
ENST00000536189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585421 83.771±0.00 42.783±0.00 N/A 19.856±16.01 41.889±0.00 69.861±0.00 2.634±0.00 16.338±0.00 N/A N/A 7.455±0.00 152.065±99.10 N/A 124.373±0.00
ENST00000586057 N/A N/A 3.296±0.00 5.201±0.00 N/A N/A N/A 4.563±0.00 10.028±0.00 5.551±0.00 N/A 4.118±0.00 N/A N/A
ENST00000592761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000108679 ENST00000262776 N/A N/A N/A 1.892±0.00 N/A N/A 7.015±0.00 N/A 3.970±0.00 5.550±0.00 1.223±0.00 46.463±41.90 N/A N/A
ENST00000585407 N/A N/A N/A N/A 5.821±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586300 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586720 N/A N/A N/A 1.841±0.00 N/A N/A 6.095±0.00 11.922±5.01 N/A N/A 7.340±0.00 N/A N/A N/A
ENST00000587251 N/A N/A 2.986±0.00 2.889±0.00 8.075±0.00 9.634±3.75 40.958±0.00 13.446±0.00 N/A 4.195±0.00 3.772±0.00 5.060±0.00 N/A 25.707±0.00
ENST00000587310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587311 14.080±0.00 18.511±0.00 N/A 16.964±0.00 33.523±28.45 19.866±0.00 49.714±0.00 20.210±0.00 10.826±0.00 48.215±41.39 5.564±0.00 131.024±0.00 101.754±28.75 22.211±0.00
ENST00000588198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588899 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591778 16.030±0.00 12.609±0.00 7.282±0.00 4.977±0.00 25.470±18.03 21.846±1.21 13.774±0.00 16.288±0.00 9.224±2.93 4.945±0.00 1.760±0.00 50.768±40.79 81.617±30.07 17.101±7.84
ENST00000592255 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267491 ENST00000591108 0.075±0.00 0.541±0.00 N/A 0.067±0.00 0.119±0.07 0.077±0.00 0.095±0.06 0.228±0.00 N/A 0.300±0.20 N/A 0.364±0.24 0.033±0.00 0.530±0.35
ENSG00000279339 ENST00000625199 0.257±0.00 0.702±0.00 0.115±0.00 0.240±0.09 0.264±0.03 0.224±0.01 0.059±0.05 0.110±0.00 0.315±0.28 0.252±0.07 0.092±0.00 0.176±0.10 0.307±0.00 0.214±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017466 ENSMUST00000017610 132.172±30.13 53.835±15.19 281.181±12.74 31.687±9.54 124.623±55.34 58.419±1.03 31.519±3.99 37.086±1.97 3.597±0.82 202.115±4.43 16.942±1.20 117.175±40.47 13.508±10.13 25.142±10.41
ENSMUST00000155707 N/A N/A N/A 60.407±0.00 N/A N/A N/A N/A N/A N/A N/A 108.022±19.85 27.081±25.03 62.721±0.00
ENSMUSG00000033880 ENSMUST00000043722 98.314±54.27 121.708±8.15 50.202±2.55 1.641±0.21 149.079±22.31 85.329±5.55 16.587±2.26 56.946±4.84 36.008±10.82 58.133±12.17 4.821±0.88 82.189±27.32 31.641±26.33 2.046±1.09
ENSMUST00000106290 N/A N/A N/A 2.781±0.00 N/A N/A N/A N/A N/A N/A N/A 26.130±0.00 19.261±13.66 0.540±0.00
ENSMUST00000127054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141459 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144529 84.746±30.05 N/A 26.408±0.00 N/A 150.532±78.39 46.920±5.48 11.651±3.54 45.943±4.88 27.190±9.36 46.990±0.11 N/A 57.082±10.50 23.603±20.21 4.117±0.49
ENSMUSG00000076433 ENSMUST00000103024 0.081±0.00 N/A 0.229±0.13 0.090±0.10 0.097±0.07 N/A 0.084±0.01 0.036±0.00 0.016±0.01 0.172±0.00 0.074±0.01 0.145±0.00 0.260±0.27 47.510±25.65
ENSMUST00000168100 0.152±0.04 0.137±0.04 0.578±0.07 0.080±0.04 0.154±0.03 0.088±0.05 0.056±0.01 0.039±0.02 0.034±0.02 0.169±0.09 0.056±0.03 0.294±0.24 0.125±0.04 1115.750±0.00

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