C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 46
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048647 Rbm46-004 ENSMUSG00000033882 10090 - 3:82837228-82876483 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048647
Transcript ID Adrenal Brain Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048647 0.096±0.00 0.082±0.00 0.058±0.01 0.040±0.02 0.080±0.00 0.124±0.05 0.022±0.00 0.243±0.04 0.638±0.00 7.134±0.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D1 CIL_0008D1_0002 VISTA 3:82670874-83271669

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003674 ND molecular_function
GO:0003723 IEA RNA binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000281722 RBM46-003 protein_coding Homo_sapiens 0 2194
ENST00000510397 RBM46-001 protein_coding Homo_sapiens 0 1864
ENST00000512640 RBM46-004 protein_coding Homo_sapiens 0 579
ENST00000514866 RBM46-002 protein_coding Homo_sapiens 0 1903

Loading