C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 46
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182818 Rbm46-002 ENSMUSG00000033882 10090 - 3:82837818-82866647 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastKidneyLiverLungOvaryPlacentaTestisENSMUST00000182818
Transcript ID Adipose Brain Breast Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000182818 0.238±0.00 0.138±0.00 0.141±0.10 0.052±0.01 0.099±0.05 0.287±0.12 0.445±0.00 1.007±0.00 3.676±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D1 CIL_0008D1_0002 VISTA 3:82670874-83271669

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000281722 RBM46-003 protein_coding Homo_sapiens 0 1866
ENST00000510397 RBM46-001 protein_coding Homo_sapiens 0 1862
ENST00000512640 RBM46-004 protein_coding Homo_sapiens 0 575
ENST00000514866 RBM46-002 protein_coding Homo_sapiens 0 2056

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