C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein phosphatase 1H (PP2C domain containing)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034613 Ppm1h 10090 + 10:122678762-122945795 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000067918 Ppm1h-001 122678782-122945795 protein_coding
  ENSMUST00000159885 Ppm1h-005 122811244-122815871 retained_intron
  ENSMUST00000160315 Ppm1h-004 122757198-122811471 processed_transcript
  ENSMUST00000161065 Ppm1h-006 122811402-122941288 retained_intron
  ENSMUST00000161371 Ppm1h-007 122811447-122886293 processed_transcript
  ENSMUST00000161487 Ppm1h-002 122678778-122921974 protein_coding
  ENSMUST00000162853 Ppm1h-003 122678762-122880333 retained_intron
  ENSMUST00000162969 Ppm1h-008 122895368-122941449 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000067918ENSMUST00000161065ENSMUST00000161371ENSMUST00000161487ENSMUST00000162853ENSMUST00000162969
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000067918 3.103±0.18 3.270±0.43 11.644±0.90 4.246±1.52 3.291±0.59 6.211±0.44 0.690±0.25 13.762±0.38 0.580±0.26 4.031±0.58 0.178±0.05 1.666±0.53 1.990±1.11 N/A
ENSMUST00000161065 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.056±0.00
ENSMUST00000161371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.641±0.00
ENSMUST00000161487 N/A 4.627±1.48 N/A N/A 3.130±0.87 2.551±0.69 N/A N/A N/A N/A N/A 1.194±0.42 N/A N/A
ENSMUST00000162853 N/A 0.832±0.00 N/A N/A N/A 2.079±0.55 N/A N/A 0.117±0.00 N/A N/A N/A N/A N/A
ENSMUST00000162969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.978±0.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZV CIL_0006ZV_0002 CGP 10:122448499-122945795
CIL_0008GR CIL_0008GR_0002 VISTA 10:122468032-123070538
CIL_0006ZD CIL_0006ZD_0002 CGP 10:122678762-123076505

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003824 IEA catalytic activity
GO:0004721 IEA phosphoprotein phosphatase activity
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0016311 IEA dephosphorylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063684 ppm1h protein phosphatase, Mg2+/Mn2+ dependent, 1H protein_coding Danio_rerio
ENSG00000111110 PPM1H protein phosphatase, Mg2+/Mn2+ dependent, 1H protein_coding Homo_sapiens

Loading