C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008GR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm697 VISTA 9606 12:62543480-63146103
GeneTranscriptPositionBiotype
ENSG00000061987 (MON2)
MON2 homolog (S. cerevisiae) 		ENST00000393629 (MON2-008) 62466848-62592865 protein_coding
ENST00000393630 (MON2-001) 62466817-62600479 protein_coding
ENST00000546600 (MON2-002) 62466822-62593278 protein_coding
ENST00000546751 (MON2-012) 62578454-62585745 retained_intron
ENST00000547095 (MON2-003) 62466848-62592865 nonsense_mediated_decay
ENST00000547287 (MON2-011) 62564973-62571423 retained_intron
ENST00000549286 (MON2-009) 62467062-62493936 nonsense_mediated_decay
ENST00000549378 (MON2-004) 62466844-62509145 processed_transcript
ENST00000549539 (MON2-010) 62565952-62571519 retained_intron
ENST00000551307 (MON2-007) 62559910-62593081 retained_intron
ENST00000551397 (MON2-013) 62587852-62592858 retained_intron
ENST00000552115 (MON2-006) 62466849-62553365 protein_coding
ENST00000552738 (MON2-005) 62466848-62592865 protein_coding
ENSG00000111110 (PPM1H)
protein phosphatase, Mg2+/Mn2+ dependent, 1H 		ENST00000228705 (PPM1H-001) 62643982-62935037 protein_coding
ENST00000547857 (PPM1H-004) 62801941-62840228 processed_transcript
ENST00000548414 (PPM1H-003) 62801931-62934048 processed_transcript
ENST00000551214 (PPM1H-006) 62648574-62721020 processed_transcript
ENST00000551519 (PPM1H-005) 62689750-62788484 retained_intron
ENSG00000139239 (RPL14P1)
ribosomal protein L14 pseudogene 1 		ENST00000484568 (RPL14P1-001) 62965325-62965969 processed_pseudogene
ENSG00000166148 (AVPR1A)
arginine vasopressin receptor 1A 		ENST00000299178 (AVPR1A-001) 63142759-63150942 protein_coding
ENST00000550940 (AVPR1A-002) 63145234-63150179 protein_coding
ENSG00000200296 (RNU1-83P)
RNA, U1 small nuclear 83, pseudogene 		ENST00000363426 (RNU1-83P-201) 62850738-62850901 snRNA
ENSG00000213352 (GAPDHP44)
glyceraldehyde 3 phosphate dehydrogenase pseudogene 44 		ENST00000513513 (GAPDHP44-001) 62755227-62756233 processed_pseudogene
ENSG00000221949 (LINC01465)
long intergenic non-protein coding RNA 1465 		ENST00000408887 (LINC01465-001) 62601751-62603690 lincRNA
ENST00000623670 (LINC01465-201) 62601751-62603434 lincRNA
ENSG00000241941 (RPL32P26)
ribosomal protein L32 pseudogene 26 		ENST00000480482 (RPL32P26-001) 62658823-62659225 processed_pseudogene
ENSG00000250517 (LDHAL6CP)
lactate dehydrogenase A-like 6C, pseudogene 		ENST00000502352 (LDHAL6CP-001) 63003553-63004694 transcribed_processed_pseudogene
ENST00000550738 (LDHAL6CP-003) 63003679-63006902 processed_transcript
ENSG00000257235 (RP11-848D3.5)
 ENST00000552996 (RP11-848D3.5-001) 63004338-63006541 lincRNA
ENSG00000257354 (RP11-631N16.2)
 ENST00000550290 (RP11-631N16.2-001) 62602752-62622213 lincRNA
ENSG00000257779 (RP11-848D3.4)
 ENST00000546650 (RP11-848D3.4-001) 63002469-63002795 processed_pseudogene
ENSG00000275180 (RP11-631N16.4)
 ENST00000619323 (RP11-631N16.4-001) 62603909-62604399 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0008GR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm697 VISTA 10090 10:122468032-123070538
GeneTranscriptPositionBiotype
ENSMUSG00000034602 (Mon2)
MON2 homolog (yeast) 		ENSMUST00000037557 (Mon2-201) 122992061-123076505 protein_coding
ENSMUST00000073792 (Mon2-202) 122992061-123076505 protein_coding
ENSMUST00000170935 (Mon2-203) 122992061-123076505 protein_coding
ENSMUSG00000034613 (Ppm1h)
protein phosphatase 1H (PP2C domain containing) 		ENSMUST00000067918 (Ppm1h-001) 122678782-122945795 protein_coding
ENSMUST00000159885 (Ppm1h-005) 122811244-122815871 retained_intron
ENSMUST00000160315 (Ppm1h-004) 122757198-122811471 processed_transcript
ENSMUST00000161065 (Ppm1h-006) 122811402-122941288 retained_intron
ENSMUST00000161371 (Ppm1h-007) 122811447-122886293 processed_transcript
ENSMUST00000161487 (Ppm1h-002) 122678778-122921974 protein_coding
ENSMUST00000162853 (Ppm1h-003) 122678762-122880333 retained_intron
ENSMUST00000162969 (Ppm1h-008) 122895368-122941449 protein_coding
ENSMUSG00000065406 (Mirlet7i)
microRNA let7i 		ENSMUST00000083472 (Mirlet7i-201) 122985634-122985723 miRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008GR_0001ENSG00000061987ENST00000393629ENST00000393630ENST00000546600ENST00000546751ENST00000547095ENST00000547287ENST00000549286ENST00000549378ENST00000549539ENST00000551307ENST00000551397ENST00000552115ENST00000552738ENSG00000111110ENST00000228705ENST00000547857ENST00000548414ENST00000551214ENST00000551519ENSG00000139239ENST00000484568ENSG00000166148ENST00000299178ENST00000550940ENSG00000200296ENST00000363426ENSG00000213352ENST00000513513ENSG00000221949ENST00000408887ENST00000623670ENSG00000241941ENST00000480482ENSG00000250517ENST00000502352ENST00000550738ENSG00000257235ENST00000552996ENSG00000257354ENST00000550290ENSG00000257779ENST00000546650ENSG00000275180ENST00000619323CIL_0008GR_0002ENSMUSG00000034602ENSMUST00000037557ENSMUST00000073792ENSMUST00000170935ENSMUSG00000034613ENSMUST00000067918ENSMUST00000159885ENSMUST00000160315ENSMUST00000161065ENSMUST00000161371ENSMUST00000161487ENSMUST00000162853ENSMUST00000162969ENSMUSG00000065406ENSMUST00000083472
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008GR_0001ENSG00000061987ENST00000393629ENST00000393630ENST00000546600ENST00000551307ENST00000552115ENSG00000111110ENST00000228705ENSG00000139239ENST00000484568ENSG00000166148ENST00000299178ENST00000550940ENSG00000200296ENST00000363426ENSG00000213352ENST00000513513ENSG00000221949ENST00000408887ENST00000623670ENSG00000241941ENST00000480482ENSG00000250517ENST00000502352ENST00000550738ENSG00000257235ENST00000552996ENSG00000257354ENST00000550290ENSG00000257779ENST00000546650ENSG00000275180ENST00000619323CIL_0008GR_0002ENSMUSG00000034602ENSMUST00000037557ENSMUST00000073792ENSMUST00000170935ENSMUSG00000034613ENSMUST00000067918ENSMUST00000161065ENSMUST00000161371ENSMUST00000161487ENSMUST00000162853ENSMUST00000162969ENSMUSG00000065406ENSMUST00000083472
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000061987 ENST00000393629 N/A N/A N/A N/A N/A N/A 0.717±0.00 N/A N/A N/A 0.667±0.24 N/A N/A N/A
ENST00000393630 N/A N/A N/A 1.195±0.00 N/A 1.231±0.00 0.283±0.00 0.714±0.00 1.278±0.00 1.350±0.00 N/A 1.417±0.10 0.402±0.00 N/A
ENST00000546600 2.624±0.00 2.706±0.00 N/A 2.945±0.85 4.139±1.06 2.387±0.08 1.023±0.45 2.505±0.59 2.059±0.32 1.884±0.20 0.742±0.00 2.488±0.54 2.056±0.08 2.719±0.17
ENST00000546751 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549286 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551307 N/A N/A N/A N/A 1.718±0.00 N/A 0.935±0.00 2.296±0.00 2.613±1.68 5.315±0.00 N/A 2.194±0.92 N/A 1.388±0.00
ENST00000551397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552115 N/A N/A N/A N/A 2.928±0.00 N/A N/A 1.776±0.00 N/A N/A 0.999±0.00 N/A N/A N/A
ENST00000552738 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000111110 ENST00000228705 0.794±0.00 0.392±0.00 1.117±0.00 9.090±2.00 1.364±0.51 0.565±0.00 0.945±0.38 2.912±0.00 1.013±0.11 0.979±0.55 0.120±0.00 4.709±3.15 4.152±1.74 0.862±0.00
ENST00000547857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548414 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000139239 ENST00000484568 0.268±0.00 0.551±0.00 0.068±0.00 0.121±0.07 0.242±0.03 0.235±0.13 0.085±0.04 0.107±0.00 0.024±0.00 0.104±0.00 0.118±0.00 1.102±1.50 0.075±0.01 0.163±0.00
ENSG00000166148 ENST00000299178 20.798±0.00 2.467±0.00 0.314±0.00 0.153±0.12 3.072±0.83 1.918±1.05 0.814±0.13 1.578±0.74 5.410±2.83 0.346±0.06 0.382±0.00 0.438±0.26 0.260±0.09 0.770±0.58
ENST00000550940 N/A N/A N/A 0.270±0.00 N/A N/A N/A N/A N/A N/A 1.886±0.00 N/A N/A N/A
ENSG00000200296 ENST00000363426 N/A N/A N/A N/A 0.142±0.00 N/A N/A N/A N/A N/A N/A 0.431±0.00 N/A 0.424±0.00
ENSG00000213352 ENST00000513513 0.174±0.00 N/A N/A N/A 0.243±0.04 0.094±0.00 0.067±0.00 0.200±0.00 N/A 0.544±0.00 0.181±0.00 0.158±0.00 N/A 0.137±0.00
ENSG00000221949 ENST00000408887 N/A N/A N/A 0.143±0.00 N/A N/A N/A N/A N/A N/A N/A 0.486±0.00 N/A N/A
ENST00000623670 0.392±0.00 N/A N/A N/A N/A N/A 0.373±0.00 0.087±0.00 0.186±0.00 N/A 0.084±0.00 N/A N/A 1.074±0.64
ENSG00000241941 ENST00000480482 0.039±0.00 N/A N/A 0.441±0.00 0.085±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000250517 ENST00000502352 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.095±0.00
ENST00000550738 0.069±0.00 0.231±0.00 N/A 0.111±0.00 0.077±0.00 0.005±0.00 0.071±0.00 0.079±0.00 0.040±0.01 0.044±0.00 N/A 0.021±0.00 0.008±0.00 0.205±0.01
ENSG00000257235 ENST00000552996 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.439±0.10
ENSG00000257354 ENST00000550290 0.069±0.00 1.288±0.00 0.510±0.00 0.170±0.03 0.514±0.17 0.206±0.17 0.180±0.01 0.309±0.21 0.157±0.07 0.229±0.11 0.159±0.11 0.302±0.09 0.276±0.07 0.255±0.18
ENSG00000257779 ENST00000546650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.400±0.00
ENSG00000275180 ENST00000619323 0.343±0.00 1.032±0.00 1.189±0.00 0.472±0.00 0.759±0.36 0.987±0.42 0.614±0.21 1.212±0.00 0.602±0.59 1.203±0.84 2.021±1.82 1.401±0.33 0.250±0.14 0.751±0.34
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034602 ENSMUST00000037557 3.462±1.81 3.965±1.93 2.207±0.44 N/A 1.741±0.62 3.817±0.51 1.874±0.85 2.296±0.86 1.344±0.64 3.472±0.85 1.178±0.57 2.812±1.99 3.650±3.52 0.788±0.16
ENSMUST00000073792 0.739±0.00 N/A 1.163±0.00 3.649±0.92 1.496±0.00 N/A N/A N/A 0.615±0.00 N/A 1.736±0.71 1.128±0.35 0.543±0.00 0.163±0.00
ENSMUST00000170935 1.962±0.46 1.578±0.38 0.888±0.04 1.256±0.00 2.555±1.61 3.241±0.62 N/A 1.284±0.19 0.855±0.17 2.036±0.76 1.027±0.31 1.827±0.37 1.743±0.13 0.547±0.02
ENSMUSG00000034613 ENSMUST00000067918 3.103±0.18 3.270±0.43 11.644±0.90 4.246±1.52 3.291±0.59 6.211±0.44 0.690±0.25 13.762±0.38 0.580±0.26 4.031±0.58 0.178±0.05 1.666±0.53 1.990±1.11 N/A
ENSMUST00000159885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161065 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.056±0.00
ENSMUST00000161371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.641±0.00
ENSMUST00000161487 N/A 4.627±1.48 N/A N/A 3.130±0.87 2.551±0.69 N/A N/A N/A N/A N/A 1.194±0.42 N/A N/A
ENSMUST00000162853 N/A 0.832±0.00 N/A N/A N/A 2.079±0.55 N/A N/A 0.117±0.00 N/A N/A N/A N/A N/A
ENSMUST00000162969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.978±0.90
ENSMUSG00000065406 ENSMUST00000083472 3765.800±0.00 15542.400±0.00 N/A N/A 11129.710±5273.29 N/A N/A N/A N/A N/A N/A 21125.233±3192.92 N/A N/A

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