C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1H (PP2C domain containing)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000067918 Ppm1h-001 ENSMUSG00000034613 10090 + 10:122678782-122945795 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000067918
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000067918 3.103±0.18 3.270±0.43 11.644±0.90 4.246±1.52 3.291±0.59 6.211±0.44 0.690±0.25 13.762±0.38 0.580±0.26 4.031±0.58 0.178±0.05 1.666±0.53 1.990±1.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZV CIL_0006ZV_0002 CGP 10:122448499-122945795
CIL_0008GR CIL_0008GR_0002 VISTA 10:122468032-123070538
CIL_0006ZD CIL_0006ZD_0002 CGP 10:122678762-123076505

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003824 IEA catalytic activity
GO:0004721 IEA phosphoprotein phosphatase activity
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0016311 IEA dephosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000228705 PPM1H-001 protein_coding Homo_sapiens 0 2331
ENST00000551214 PPM1H-006 processed_transcript Homo_sapiens 0 708
ENST00000551519 PPM1H-005 retained_intron Homo_sapiens 0 617

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