C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1H (PP2C domain containing)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162853 Ppm1h-003 ENSMUSG00000034613 10090 + 10:122678762-122880333 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonLiverENSMUST00000162853
Transcript ID Adrenal Colon Liver
ENSMUST00000162853 0.832±0.00 2.079±0.55 0.117±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZV CIL_0006ZV_0002 CGP 10:122448499-122945795
CIL_0008GR CIL_0008GR_0002 VISTA 10:122468032-123070538
CIL_0006ZD CIL_0006ZD_0002 CGP 10:122678762-123076505

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000228705 PPM1H-001 protein_coding Homo_sapiens 0 1506
ENST00000551214 PPM1H-006 processed_transcript Homo_sapiens 4.00001e-41 172
ENST00000551519 PPM1H-005 retained_intron Homo_sapiens 0 424

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