C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SET domain without mariner transposase fusion
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034639 Setmar 10090 + 6:108065045-108077122 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000049246 Setmar-001 108065045-108077122 protein_coding
  ENSMUST00000138140 Setmar-002 108065062-108076061 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049246ENSMUST00000138140
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049246 2.110±0.37 0.990±0.18 3.345±0.85 2.406±0.39 1.350±0.34 1.143±0.15 1.003±0.14 2.141±0.26 1.123±0.40 1.740±0.25 2.010±0.30 2.328±0.75 1.719±0.51 0.409±0.18
ENSMUST00000138140 N/A N/A N/A N/A 0.394±0.00 N/A N/A N/A 0.334±0.01 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00050L CIL_00050L_0002 CGP 6:107529726-108077122

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000729 IEA DNA double-strand break processing
GO:0000737 IEA DNA catabolic process, endonucleolytic
GO:0004519 IEA endonuclease activity
GO:0005634 IEA nucleus
GO:0006303 ISS double-strand break repair via nonhomologous end joining
GO:0008270 IEA zinc ion binding
GO:0018024 IEA histone-lysine N-methyltransferase activity
GO:0034968 IEA histone lysine methylation
GO:0035861 ISS site of double-strand break
GO:0042803 IEA protein homodimerization activity
GO:0043566 IEA structure-specific DNA binding
GO:0071157 IEA negative regulation of cell cycle arrest
GO:2001034 IEA positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 IEA negative regulation of chromosome organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074836 setmar SET domain without mariner transposase fusion protein_coding Danio_rerio
ENSG00000170364 SETMAR SET domain and mariner transposase fusion gene protein_coding Homo_sapiens

Loading