C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: YTH domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034653 Ythdc2 10090 + 18:44828665-44889720 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000037763 Ythdc2-201 44828665-44889720 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037763
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037763 0.898±0.09 0.733±0.40 1.634±0.03 2.232±0.63 0.999±0.15 1.081±0.21 0.839±0.09 0.568±0.11 1.367±0.96 0.712±0.41 0.782±0.17 1.262±0.41 0.729±0.32 2.263±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UP CIL_0004UP_0002 CGP 18:44828665-45686024

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding
GO:0005783 IEA endoplasmic reticulum
GO:0006200 IEA ATP catabolic process
GO:0008186 IEA RNA-dependent ATPase activity
GO:0034612 IEA response to tumor necrosis factor
GO:0044822 IEA poly(A) RNA binding
GO:0044829 IEA positive regulation by host of viral genome replication
GO:0070063 IEA RNA polymerase binding
GO:0070555 IEA response to interleukin-1

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000047188 YTHDC2 YTH domain containing 2 protein_coding Homo_sapiens

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