C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribonucleic acid binding protein S1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034681 Rnps1 10090 + 17:24414675-24425895 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000088512 Rnps1-201 24414675-24425895 protein_coding
  ENSMUST00000115371 Rnps1-202 24414675-24425895 protein_coding
  ENSMUST00000163717 Rnps1-203 24414675-24425895 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000088512ENSMUST00000115371ENSMUST00000163717
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000088512 N/A 32.827±0.00 5.950±0.47 42.357±5.05 6.068±4.87 N/A N/A N/A 15.416±10.81 N/A 4.537±1.16 10.754±4.91 9.655±4.19 3.690±1.52
ENSMUST00000115371 18.942±8.22 27.418±8.93 28.812±2.04 50.010±3.50 27.402±9.72 29.180±5.73 13.270±2.11 19.071±1.97 34.873±31.63 22.261±1.37 3.116±0.45 28.298±15.94 19.268±15.01 9.939±0.83
ENSMUST00000163717 2.914±1.34 5.213±0.69 6.575±0.40 23.691±10.99 8.440±0.00 3.161±0.00 5.135±0.41 2.345±0.34 4.361±2.00 4.474±0.69 8.137±1.47 8.443±4.59 8.106±1.34 4.128±1.14

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000184 IEA nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000381 ISS regulation of alternative mRNA splicing, via spliceosome
GO:0003730 IEA mRNA 3'-UTR binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0043065 ISS positive regulation of apoptotic process
GO:0044822 IEA poly(A) RNA binding
GO:0048025 ISS negative regulation of mRNA splicing, via spliceosome
GO:0061574 ISS ASAP complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015853 rnps1 RNA binding protein S1, serine-rich domain protein_coding Danio_rerio
ENSG00000205937 RNPS1 RNA binding protein S1, serine-rich domain protein_coding Homo_sapiens

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