C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: collagen beta(1-O)galactosyltransferase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034807 Colgalt1 10090 + 8:71611024-71624909 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000047903 Colgalt1-201 71611024-71624909 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047903
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047903 47.733±20.57 41.278±25.45 45.303±6.41 35.038±10.65 48.346±20.20 36.089±8.20 15.655±3.79 17.291±6.98 23.696±4.84 56.427±14.08 11.562±0.91 80.550±33.60 58.425±17.84 7.929±2.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00076B CIL_00076B_0002 CGP 8:71597648-71624909
CIL_00076A CIL_00076A_0002 CGP 8:71611024-71671757

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005788 ISS endoplasmic reticulum lumen
GO:0009103 IEA lipopolysaccharide biosynthetic process
GO:0016020 IEA membrane
GO:0050211 IEA procollagen galactosyltransferase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058270 COLGALT1 (1 of 3) collagen beta(1-O)galactosyltransferase 1 protein_coding Danio_rerio
ENSDARG00000073974 colgalt1 collagen beta(1-O)galactosyltransferase 1 protein_coding Danio_rerio
ENSDARG00000078276 COLGALT1 (3 of 3) collagen beta(1-O)galactosyltransferase 1 protein_coding Danio_rerio
ENSG00000130309 COLGALT1 collagen beta(1-O)galactosyltransferase 1 protein_coding Homo_sapiens

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