C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00076A_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130309-ENSG00000130477 CGP 9606 19:17555594-17688365
GeneTranscriptPositionBiotype
ENSG00000130309 (COLGALT1)
collagen beta(1-O)galactosyltransferase 1 		ENST00000252599 (COLGALT1-001) 17555594-17583159 protein_coding
ENST00000593832 (COLGALT1-004) 17579951-17583162 retained_intron
ENST00000597075 (COLGALT1-008) 17577075-17580870 retained_intron
ENST00000597147 (COLGALT1-007) 17568613-17580806 protein_coding
ENST00000600474 (COLGALT1-005) 17556561-17568577 protein_coding
ENST00000601354 (COLGALT1-006) 17566033-17571924 processed_transcript
ENSG00000130477 (UNC13A)
unc-13 homolog A (C. elegans) 		ENST00000252773 (UNC13A-201) 17601329-17676169 protein_coding
ENST00000517497 (UNC13A-006) 17609975-17619042 retained_intron
ENST00000519716 (UNC13A-001) 17601328-17688199 protein_coding
ENST00000523229 (UNC13A-003) 17606314-17612160 retained_intron
ENST00000550896 (UNC13A-004) 17606051-17688365 protein_coding
ENST00000551649 (UNC13A-002) 17605321-17688349 protein_coding
ENST00000552293 (UNC13A-005) 17605961-17688326 protein_coding
ENST00000601528 (UNC13A-007) 17626288-17628337 retained_intron
ENSG00000243771 (CTD-3131K8.1)
 ENST00000469924 (CTD-3131K8.1-001) 17589595-17590071 processed_pseudogene
ENSG00000269752 (CTD-3149D2.3)
 ENST00000600512 (CTD-3149D2.3-001) 17613722-17614430 antisense
ENSG00000279300 (CTD-3149D2.2)
 ENST00000624803 (CTD-3149D2.2-001) 17622447-17623338 TEC
CIL_00076A_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034807-ENSMUSG00000034799 CGP 10090 8:71611024-71671757
GeneTranscriptPositionBiotype
ENSMUSG00000034799 (Unc13a)
unc-13 homolog A (C. elegans) 		ENSMUST00000030170 (Unc13a-001) 71624417-71671757 protein_coding
ENSMUST00000175780 (Unc13a-004) 71660346-71668082 retained_intron
ENSMUST00000175909 (Unc13a-008) 71634623-71641397 nonsense_mediated_decay
ENSMUST00000176127 (Unc13a-007) 71641460-71645953 protein_coding
ENSMUST00000176426 (Unc13a-005) 71653607-71658495 protein_coding
ENSMUST00000176777 (Unc13a-003) 71660341-71671741 retained_intron
ENSMUST00000177032 (Unc13a-006) 71634889-71642568 retained_intron
ENSMUST00000177517 (Unc13a-002) 71629054-71671736 protein_coding
ENSMUSG00000034807 (Colgalt1)
collagen beta(1-O)galactosyltransferase 1 		ENSMUST00000047903 (Colgalt1-201) 71611024-71624909 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00076A_0001ENSG00000130309ENST00000252599ENST00000593832ENST00000597075ENST00000597147ENST00000600474ENST00000601354ENSG00000130477ENST00000252773ENST00000517497ENST00000519716ENST00000523229ENST00000550896ENST00000551649ENST00000552293ENST00000601528ENSG00000243771ENST00000469924ENSG00000269752ENST00000600512ENSG00000279300ENST00000624803CIL_00076A_0002ENSMUSG00000034799ENSMUST00000030170ENSMUST00000175780ENSMUST00000175909ENSMUST00000176127ENSMUST00000176426ENSMUST00000176777ENSMUST00000177032ENSMUST00000177517ENSMUSG00000034807ENSMUST00000047903
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00076A_0001ENSG00000130309ENST00000252599ENST00000593832ENST00000597147ENSG00000130477ENST00000252773ENST00000519716ENST00000550896ENST00000551649ENSG00000243771ENST00000469924ENSG00000269752ENST00000600512ENSG00000279300ENST00000624803CIL_00076A_0002ENSMUSG00000034799ENSMUST00000030170ENSMUST00000177517ENSMUSG00000034807ENSMUST00000047903
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130309 ENST00000252599 49.806±0.00 24.603±0.00 0.235±0.00 2.116±1.21 12.729±8.35 10.246±6.97 5.660±4.41 4.682±3.02 4.696±1.51 13.308±8.63 7.648±7.23 22.338±8.84 38.523±2.95 13.539±5.82
ENST00000593832 N/A 13.929±0.00 0.804±0.00 1.754±0.82 2.510±1.27 3.216±1.54 0.190±0.00 0.613±0.00 1.506±0.00 5.518±0.00 N/A 7.177±0.00 N/A 3.971±0.27
ENST00000597075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000597147 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 35.568±0.00 31.772±0.00 12.685±0.00
ENST00000600474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000130477 ENST00000252773 N/A N/A 0.002±0.00 6.314±0.00 N/A N/A 0.008±0.00 0.012±0.00 0.003±0.00 0.016±0.00 0.002±0.00 0.002±0.00 0.020±0.01 0.194±0.09
ENST00000517497 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519716 N/A N/A 0.002±0.00 4.571±1.44 N/A N/A 0.007±0.00 0.011±0.00 0.003±0.00 0.016±0.00 0.002±0.00 0.002±0.00 0.020±0.01 0.057±0.00
ENST00000523229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550896 N/A N/A N/A N/A N/A N/A 0.020±0.00 N/A 0.051±0.00 N/A N/A N/A N/A N/A
ENST00000551649 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.018±0.00 N/A N/A N/A N/A
ENST00000552293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601528 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000243771 ENST00000469924 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.140±0.00 0.023±0.00 0.044±0.00 N/A N/A
ENSG00000269752 ENST00000600512 0.691±0.00 1.712±0.00 N/A 1.296±0.00 0.870±0.00 0.394±0.00 0.253±0.00 1.039±0.00 0.161±0.00 0.327±0.00 0.394±0.00 0.419±0.19 N/A 0.496±0.03
ENSG00000279300 ENST00000624803 N/A 0.173±0.00 N/A 0.361±0.00 0.100±0.00 N/A 0.018±0.00 0.039±0.00 0.052±0.00 0.054±0.00 0.067±0.00 N/A N/A 0.018±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034799 ENSMUST00000030170 N/A 4.007±0.37 N/A 20.225±3.20 N/A 2.403±0.10 1.288±0.00 N/A 0.939±0.02 N/A N/A 4.421±0.20 N/A 0.836±0.00
ENSMUST00000175780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000175909 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176127 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176426 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176777 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177032 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177517 N/A N/A N/A 24.012±16.16 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000034807 ENSMUST00000047903 47.733±20.57 41.278±25.45 45.303±6.41 35.038±10.65 48.346±20.20 36.089±8.20 15.655±3.79 17.291±6.98 23.696±4.84 56.427±14.08 11.562±0.91 80.550±33.60 58.425±17.84 7.929±2.38

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