C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CUGBP, Elav-like family member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119060 Celf5-004 ENSMUSG00000034818 10090 - 10:81459228-81473127 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000119060
Transcript ID Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000119060 2.363±0.00 0.054±0.00 0.079±0.00 0.029±0.01 0.005±0.00 0.026±0.01 0.081±0.05 0.044±0.00 6.868±0.38

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000093312 celf5a-001 protein_coding Danio_rerio 0 235
ENSDART00000024206 celf3b-201 protein_coding Danio_rerio 1.4013e-45 189
ENSDART00000148426 celf3b-001 protein_coding Danio_rerio 1.4013e-45 189
ENSDART00000151315 celf3a-002 retained_intron Danio_rerio 2e-40 172
ENSDART00000039629 celf3a-001 protein_coding Danio_rerio 2e-40 172
ENSDART00000093310 celf5a-201 protein_coding Danio_rerio 1e-27 130
ENST00000292672 CELF5-001 protein_coding Homo_sapiens 0 1024
ENST00000334293 CELF5-004 nonsense_mediated_decay Homo_sapiens 0 1354
ENST00000541430 CELF5-002 protein_coding Homo_sapiens 0 702
ENST00000586050 CELF5-008 processed_transcript Homo_sapiens 0 270
ENST00000588101 CELF5-007 processed_transcript Homo_sapiens 0 344
ENST00000588350 CELF5-005 nonsense_mediated_decay Homo_sapiens 0 1323
ENST00000589370 CELF5-009 processed_transcript Homo_sapiens 0 776
ENST00000591483 CELF5-006 retained_intron Homo_sapiens 0 455

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