C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ankyrin repeat domain 27 (VPS9 domain)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040844 Ankrd27-001 ENSMUSG00000034867 10090 + 7:35586244-35639226 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040844
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040844 8.233±1.58 3.539±1.49 9.864±0.40 5.065±0.61 5.857±1.48 5.745±1.65 2.117±0.64 3.753±0.59 6.764±3.05 6.723±1.30 2.443±0.49 6.869±1.96 4.904±2.03 3.265±0.86

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005096 IEA GTPase activator activity
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005764 IEA lysosome
GO:0005769 IEA early endosome
GO:0016020 IEA membrane
GO:0043547 IEA positive regulation of GTPase activity
GO:0045022 IEA early endosome to late endosome transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306065 ANKRD27-001 protein_coding Homo_sapiens 0 2551
ENST00000586463 ANKRD27-003 protein_coding Homo_sapiens 0 457
ENST00000587352 ANKRD27-002 protein_coding Homo_sapiens 0 1179
ENST00000588700 ANKRD27-004 nonsense_mediated_decay Homo_sapiens 0 486
ENST00000593232 ANKRD27-008 retained_intron Homo_sapiens 0 224
ENST00000622502 ANKRD27-201 protein_coding Homo_sapiens 0 1173

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