C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: otoancorin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034990 Otoa 10090 + 7:121083322-121163097 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000047025 Otoa-001 121083322-121163097 protein_coding
  ENSMUST00000163275 Otoa-003 121118390-121163091 processed_transcript
  ENSMUST00000165409 Otoa-002 121118385-121160768 retained_intron
  ENSMUST00000168311 Otoa-005 121083424-121091577 protein_coding
  ENSMUST00000170106 Otoa-006 121083408-121102728 protein_coding
  ENSMUST00000171880 Otoa-004 121083424-121091595 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047025ENSMUST00000163275ENSMUST00000165409ENSMUST00000168311ENSMUST00000170106
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047025 N/A 0.108±0.02 0.020±0.00 0.020±0.00 N/A N/A 0.014±0.00 0.097±0.00 0.003±0.00 0.019±0.00 0.032±0.01 N/A 1.099±0.99 0.045±0.02
ENSMUST00000163275 0.028±0.01 0.225±0.10 0.018±0.00 0.039±0.00 0.047±0.01 0.021±0.00 0.021±0.01 0.109±0.02 0.013±0.01 0.028±0.00 0.051±0.00 0.146±0.07 1.212±0.98 0.097±0.04
ENSMUST00000165409 N/A 0.123±0.04 N/A 0.058±0.00 N/A N/A N/A 0.112±0.03 N/A N/A N/A 0.143±0.12 0.128±0.00 0.031±0.00
ENSMUST00000168311 N/A N/A 0.088±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170106 0.057±0.01 0.421±0.01 N/A 0.058±0.00 0.147±0.00 N/A N/A N/A 0.009±0.00 N/A 0.101±0.00 0.228±0.01 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RG CIL_0008RG_0002 VISTA 7:120952178-121553246
CIL_0003I0 CIL_0003I0_0002 CGP 7:121064067-121163097

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005578 IEA proteinaceous extracellular matrix
GO:0007160 IMP cell-matrix adhesion
GO:0007605 IMP sensory perception of sound
GO:0016324 IDA apical plasma membrane
GO:0019226 IMP transmission of nerve impulse
GO:0031225 IEA anchored component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000155719 OTOA otoancorin protein_coding Homo_sapiens

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