C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ABI gene family, member 3 (NESH) binding protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035258 Abi3bp 10090 + 16:56477846-56690128 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000048471 Abi3bp-201 56477846-56690128 protein_coding
  ENSMUST00000096012 Abi3bp-202 56477846-56690128 protein_coding
  ENSMUST00000096013 Abi3bp-203 56477846-56690128 protein_coding
  ENSMUST00000171000 Abi3bp-204 56477846-56690128 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048471ENSMUST00000096012ENSMUST00000096013ENSMUST00000171000
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048471 0.721±0.00 N/A 3.138±0.00 0.075±0.03 0.908±0.00 0.712±0.26 N/A 0.411±0.10 0.129±0.09 N/A 0.407±0.03 0.760±0.38 0.255±0.12 0.044±0.00
ENSMUST00000096012 N/A 0.174±0.00 N/A 0.573±0.00 0.583±0.00 1.122±0.24 N/A 0.427±0.00 0.276±0.15 N/A 0.579±0.00 0.554±0.08 0.099±0.02 N/A
ENSMUST00000096013 2.402±0.00 0.597±0.25 2.405±0.00 0.069±0.05 1.093±0.44 1.158±0.28 0.469±0.02 0.679±0.18 0.171±0.12 2.061±0.04 0.452±0.19 0.801±0.24 0.309±0.33 0.152±0.08
ENSMUST00000171000 0.919±0.00 0.477±0.39 3.438±0.59 0.142±0.09 0.674±0.06 1.740±0.29 0.587±0.13 0.523±0.05 0.354±0.19 2.561±0.00 0.524±0.23 1.248±0.60 0.129±0.12 0.124±0.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005518 IDA collagen binding
GO:0005539 IDA glycosaminoglycan binding
GO:0005614 IDA interstitial matrix
GO:0005615 IEA extracellular space
GO:0008201 IDA heparin binding
GO:0010811 IDA positive regulation of cell-substrate adhesion
GO:0030198 IDA extracellular matrix organization
GO:0031012 IDA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062156 ABI3BP (1 of 2) ABI family, member 3 (NESH) binding protein protein_coding Danio_rerio
ENSDARG00000071095 abi3bp ABI family, member 3 (NESH) binding protein protein_coding Danio_rerio
ENSG00000154175 ABI3BP ABI family, member 3 (NESH) binding protein protein_coding Homo_sapiens

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