C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ABI gene family, member 3 (NESH) binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048471 Abi3bp-201 ENSMUSG00000035258 10090 + 16:56477846-56690128 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000048471
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000048471 0.721±0.00 3.138±0.00 0.075±0.03 0.908±0.00 0.712±0.26 0.411±0.10 0.129±0.09 0.407±0.03 0.760±0.38 0.255±0.12 0.044±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005518 IDA collagen binding
GO:0005539 IDA glycosaminoglycan binding
GO:0005614 IDA interstitial matrix
GO:0005615 IEA extracellular space
GO:0008201 IDA heparin binding
GO:0010811 IDA positive regulation of cell-substrate adhesion
GO:0030198 IDA extracellular matrix organization
GO:0031012 IDA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000284322 ABI3BP-001 protein_coding Homo_sapiens 0 1291
ENST00000459682 ABI3BP-011 protein_coding Homo_sapiens 1e-31 139
ENST00000470336 ABI3BP-007 retained_intron Homo_sapiens 0 1437
ENST00000471714 ABI3BP-002 protein_coding Homo_sapiens 0 1724
ENST00000475896 ABI3BP-003 retained_intron Homo_sapiens 0 1284
ENST00000483129 ABI3BP-010 protein_coding Homo_sapiens 0 387
ENST00000487012 ABI3BP-009 retained_intron Homo_sapiens 0 1533
ENST00000495063 ABI3BP-006 protein_coding Homo_sapiens 0 1724
ENST00000495591 ABI3BP-008 protein_coding Homo_sapiens 0 1249
ENST00000497021 ABI3BP-021 retained_intron Homo_sapiens 0 440
ENST00000527258 ABI3BP-023 protein_coding Homo_sapiens 0 647
ENST00000530236 ABI3BP-024 nonsense_mediated_decay Homo_sapiens 3e-35 152
ENST00000530539 ABI3BP-022 protein_coding Homo_sapiens 0 518
ENST00000533855 ABI3BP-027 protein_coding Homo_sapiens 0 333

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