C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ABI gene family, member 3 (NESH) binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171000 Abi3bp-204 ENSMUSG00000035258 10090 + 16:56477846-56690128 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000171000
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000171000 0.919±0.00 0.477±0.39 3.438±0.59 0.142±0.09 0.674±0.06 1.740±0.29 0.587±0.13 0.523±0.05 0.354±0.19 2.561±0.00 0.524±0.23 1.248±0.60 0.129±0.12 0.124±0.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005518 IDA collagen binding
GO:0005539 IDA glycosaminoglycan binding
GO:0005614 IDA interstitial matrix
GO:0008201 IDA heparin binding
GO:0010811 IDA positive regulation of cell-substrate adhesion
GO:0030198 IDA extracellular matrix organization
GO:0031012 IDA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000284322 ABI3BP-001 protein_coding Homo_sapiens 0 1290
ENST00000470336 ABI3BP-007 retained_intron Homo_sapiens 0 1504
ENST00000471714 ABI3BP-002 protein_coding Homo_sapiens 0 1437
ENST00000475896 ABI3BP-003 retained_intron Homo_sapiens 0 1284
ENST00000483129 ABI3BP-010 protein_coding Homo_sapiens 0 348
ENST00000487012 ABI3BP-009 retained_intron Homo_sapiens 0 1437
ENST00000495063 ABI3BP-006 protein_coding Homo_sapiens 0 1288
ENST00000495591 ABI3BP-008 protein_coding Homo_sapiens 0 1249
ENST00000497021 ABI3BP-021 retained_intron Homo_sapiens 0 440
ENST00000527258 ABI3BP-023 protein_coding Homo_sapiens 0 647
ENST00000530236 ABI3BP-024 nonsense_mediated_decay Homo_sapiens 3e-35 152
ENST00000530539 ABI3BP-022 protein_coding Homo_sapiens 0 518

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