C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAB GTPase activating protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035437 Rabgap1 10090 + 2:37443279-37566454 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000061179 Rabgap1-201 37443285-37566437 protein_coding
  ENSMUST00000066055 Rabgap1-001 37452245-37544962 protein_coding
  ENSMUST00000112920 Rabgap1-004 37452267-37566454 protein_coding
  ENSMUST00000130601 Rabgap1-006 37491931-37509138 processed_transcript
  ENSMUST00000133434 Rabgap1-003 37443279-37495589 protein_coding
  ENSMUST00000148470 Rabgap1-005 37452245-37475363 protein_coding
  ENSMUST00000153145 Rabgap1-002 37443296-37488166 processed_transcript
  ENSMUST00000159092 Rabgap1-007 37516519-37565053 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000061179ENSMUST00000112920ENSMUST00000159092
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000061179 5.816±1.83 2.740±0.50 4.380±0.51 10.244±3.79 3.484±0.69 3.368±0.64 3.119±0.64 4.712±0.74 1.921±0.38 5.568±0.78 1.847±0.51 4.460±0.99 4.084±0.94 4.949±0.00
ENSMUST00000112920 3.365±0.00 N/A 7.903±0.62 12.240±4.58 7.234±0.00 N/A 2.044±0.59 1.684±0.00 3.028±0.49 N/A 4.846±0.64 10.359±3.03 6.668±1.46 3.966±0.28
ENSMUST00000159092 N/A N/A N/A 34.854±0.00 N/A N/A N/A N/A N/A N/A N/A 38.268±0.00 28.308±1.38 23.806±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006WQ CIL_0006WQ_0002 CGP 2:37432168-37566454

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005097 IEA Rab GTPase activator activity
GO:0005737 IEA cytoplasm
GO:0005829 IEA cytosol
GO:0005856 IEA cytoskeleton
GO:0007049 IEA cell cycle
GO:0017137 IEA Rab GTPase binding
GO:0032851 IEA positive regulation of Rab GTPase activity
GO:0033124 IEA regulation of GTP catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010297 RABGAP1 RAB GTPase activating protein 1 protein_coding Danio_rerio
ENSG00000011454 RABGAP1 RAB GTPase activating protein 1 protein_coding Homo_sapiens

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