C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006WQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000171448-ENSG00000011454 CGP 9606 9:122915566-123104866
GeneTranscriptPositionBiotype
ENSG00000171448 (ZBTB26)
zinc finger and BTB domain containing 26 		ENST00000373654 (ZBTB26-002) 122918100-122931265 protein_coding
ENST00000373656 (ZBTB26-001) 122915566-122931500 protein_coding
ENSG00000213216 (RP11-355O1.7)
 ENST00000392902 (RP11-355O1.7-001) 123029373-123029753 processed_pseudogene
ENSG00000222351 (RNY1P15)
RNA, Ro-associated Y1 pseudogene 15 		ENST00000410419 (RNY1P15-201) 122945988-122946094 misc_RNA
ENSG00000225078 (RP11-123N4.4)
 ENST00000422282 (RP11-123N4.4-001) 123061845-123063312 processed_pseudogene
ENSG00000261094 (RP11-355O1.11)
 ENST00000561961 (RP11-355O1.11-002) 122937623-122940326 sense_overlapping
ENST00000566531 (RP11-355O1.11-001) 122939420-122940333 sense_overlapping

Homo sapiens Ensembl (GRCh38)

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CIL_0006WQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000050714-ENSMUSG00000035437 CGP 10090 2:37432168-37566454
GeneTranscriptPositionBiotype
ENSMUSG00000026915 (Strbp)
spermatid perinuclear RNA binding protein 		ENSMUST00000028279 (Strbp-201) 37569868-37647285 protein_coding
ENSMUST00000072186 (Strbp-001) 37583156-37703275 protein_coding
ENSMUST00000135488 (Strbp-002) 37634928-37703348 processed_transcript
ENSMUST00000144206 (Strbp-004) 37647120-37703149 processed_transcript
ENSMUST00000145808 (Strbp-006) 37635457-37657910 protein_coding
ENSMUST00000155237 (Strbp-005) 37640855-37703859 protein_coding
ENSMUST00000183690 (Strbp-003) 37483228-37647219 nonsense_mediated_decay
ENSMUSG00000035437 (Rabgap1)
RAB GTPase activating protein 1 		ENSMUST00000061179 (Rabgap1-201) 37443285-37566437 protein_coding
ENSMUST00000066055 (Rabgap1-001) 37452245-37544962 protein_coding
ENSMUST00000112920 (Rabgap1-004) 37452267-37566454 protein_coding
ENSMUST00000130601 (Rabgap1-006) 37491931-37509138 processed_transcript
ENSMUST00000133434 (Rabgap1-003) 37443279-37495589 protein_coding
ENSMUST00000148470 (Rabgap1-005) 37452245-37475363 protein_coding
ENSMUST00000153145 (Rabgap1-002) 37443296-37488166 processed_transcript
ENSMUST00000159092 (Rabgap1-007) 37516519-37565053 processed_transcript
ENSMUSG00000050714 (Zbtb26)
zinc finger and BTB domain containing 26 		ENSMUST00000067043 (Zbtb26-001) 37432168-37443121 protein_coding
ENSMUST00000102789 (Zbtb26-002) 37435018-37443120 protein_coding
ENSMUSG00000066798 (Zbtb6)
zinc finger and BTB domain containing 6 		ENSMUST00000053098 (Zbtb6-201) 37425500-37430919 protein_coding
ENSMUST00000112932 (Zbtb6-001) 37425503-37443171 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006WQ_0001ENSG00000171448ENST00000373654ENST00000373656ENSG00000213216ENST00000392902ENSG00000222351ENST00000410419ENSG00000225078ENST00000422282ENSG00000261094ENST00000561961ENST00000566531CIL_0006WQ_0002ENSMUSG00000026915ENSMUST00000028279ENSMUST00000072186ENSMUST00000135488ENSMUST00000144206ENSMUST00000145808ENSMUST00000155237ENSMUST00000183690ENSMUSG00000035437ENSMUST00000061179ENSMUST00000066055ENSMUST00000112920ENSMUST00000130601ENSMUST00000133434ENSMUST00000148470ENSMUST00000153145ENSMUST00000159092ENSMUSG00000050714ENSMUST00000067043ENSMUST00000102789ENSMUSG00000066798ENSMUST00000053098ENSMUST00000112932
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006WQ_0001ENSG00000171448ENST00000373654ENST00000373656ENSG00000213216ENST00000392902ENSG00000222351ENST00000410419ENSG00000225078ENST00000422282ENSG00000261094ENST00000561961ENST00000566531CIL_0006WQ_0002ENSMUSG00000026915ENSMUST00000028279ENSMUST00000072186ENSMUST00000135488ENSMUST00000155237ENSMUST00000183690ENSMUSG00000035437ENSMUST00000061179ENSMUST00000112920ENSMUST00000159092ENSMUSG00000050714ENSMUST00000067043ENSMUST00000102789ENSMUSG00000066798ENSMUST00000053098ENSMUST00000112932
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000171448 ENST00000373654 N/A N/A 0.321±0.00 N/A 0.991±0.00 N/A 0.162±0.00 0.182±0.00 N/A N/A 0.113±0.00 N/A N/A 1.971±0.00
ENST00000373656 0.654±0.00 0.978±0.00 0.411±0.00 0.675±0.02 0.902±0.12 1.327±0.32 0.433±0.07 0.480±0.00 1.035±0.85 1.086±0.46 0.482±0.14 1.746±0.55 0.827±0.07 2.238±1.01
ENSG00000213216 ENST00000392902 0.141±0.00 0.216±0.00 N/A 0.073±0.00 0.523±0.31 0.425±0.32 0.288±0.25 0.841±0.81 0.614±0.00 0.066±0.00 0.704±0.00 0.092±0.00 N/A 0.064±0.00
ENSG00000222351 ENST00000410419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.758±0.00 1.682±0.00 0.732±0.00
ENSG00000225078 ENST00000422282 0.010±0.00 0.209±0.00 N/A 0.105±0.00 0.119±0.10 N/A N/A 0.048±0.00 0.044±0.00 0.244±0.00 N/A 0.030±0.00 N/A N/A
ENSG00000261094 ENST00000561961 0.060±0.00 0.501±0.00 0.069±0.00 0.139±0.03 0.138±0.01 0.146±0.08 0.127±0.06 0.330±0.21 0.124±0.10 0.209±0.09 N/A 0.338±0.22 0.092±0.04 0.622±0.38
ENST00000566531 0.162±0.00 1.066±0.00 N/A 0.193±0.10 0.347±0.00 0.097±0.00 0.233±0.00 0.742±0.00 0.228±0.08 0.089±0.00 1.085±0.00 1.501±0.89 0.362±0.29 1.762±1.09
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026915 ENSMUST00000028279 N/A 1.204±0.18 1.153±0.00 5.147±3.03 1.004±0.00 1.239±0.47 0.364±0.02 1.969±0.00 0.749±0.19 1.811±0.00 0.689±0.15 2.227±0.81 0.618±0.00 1.622±0.44
ENSMUST00000072186 N/A N/A 4.919±0.55 27.330±3.83 N/A 4.644±0.76 N/A 3.410±0.12 4.987±2.29 N/A 2.109±0.26 9.743±0.71 7.007±1.86 21.953±5.34
ENSMUST00000135488 N/A N/A N/A N/A N/A 12.991±4.75 N/A N/A 4.902±0.00 N/A N/A 12.133±1.35 N/A 22.519±0.00
ENSMUST00000144206 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 61.471±0.00
ENSMUST00000183690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.907±0.00
ENSMUSG00000035437 ENSMUST00000061179 5.816±1.83 2.740±0.50 4.380±0.51 10.244±3.79 3.484±0.69 3.368±0.64 3.119±0.64 4.712±0.74 1.921±0.38 5.568±0.78 1.847±0.51 4.460±0.99 4.084±0.94 4.949±0.00
ENSMUST00000066055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000112920 3.365±0.00 N/A 7.903±0.62 12.240±4.58 7.234±0.00 N/A 2.044±0.59 1.684±0.00 3.028±0.49 N/A 4.846±0.64 10.359±3.03 6.668±1.46 3.966±0.28
ENSMUST00000130601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148470 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153145 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159092 N/A N/A N/A 34.854±0.00 N/A N/A N/A N/A N/A N/A N/A 38.268±0.00 28.308±1.38 23.806±0.00
ENSMUSG00000050714 ENSMUST00000067043 0.906±0.44 0.896±0.28 1.647±0.56 2.472±1.42 0.863±0.28 0.708±0.21 0.445±0.04 0.744±0.18 1.199±0.70 1.164±0.33 0.437±0.27 1.166±0.52 1.196±0.60 0.650±0.20
ENSMUST00000102789 1.766±0.49 1.152±0.26 N/A N/A 1.391±0.55 1.364±0.00 0.542±0.12 0.859±0.03 0.521±0.02 1.439±0.16 N/A 2.986±0.55 N/A 0.850±0.15
ENSMUSG00000066798 ENSMUST00000053098 1.241±0.47 N/A 4.079±0.56 5.447±2.60 1.562±0.70 1.778±0.61 0.714±0.12 1.637±0.41 2.349±1.45 1.954±0.29 0.575±0.23 2.906±0.77 2.932±1.49 0.415±0.00
ENSMUST00000112932 1.084±0.53 1.437±0.62 N/A N/A 2.265±1.01 1.987±0.88 0.317±0.14 1.076±0.58 0.623±0.14 1.511±0.90 0.339±0.19 2.279±0.42 N/A 1.498±0.13

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