C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: myosin ID
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035441 Myo1d 10090 - 11:80482126-80780025 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000041065 Myo1d-001 80482126-80780025 protein_coding
  ENSMUST00000070997 Myo1d-002 80583827-80780025 protein_coding
  ENSMUST00000125944 Myo1d-003 80673667-80780003 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041065
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041065 7.435±1.78 22.702±9.54 13.419±2.39 1.437±1.35 4.205±1.49 68.669±5.57 2.922±0.17 17.772±2.08 3.529±0.51 39.248±1.37 0.991±0.14 12.272±3.41 17.373±6.26 1.984±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005RL CIL_0005RL_0003 CGP 11:80477023-80780025
CIL_0005K8 CIL_0005K8_0002 CGP 11:80482126-80822033

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000146 IEA microfilament motor activity
GO:0005516 IEA calmodulin binding
GO:0005524 IEA ATP binding
GO:0005768 ISS endosome
GO:0005790 IEA smooth endoplasmic reticulum
GO:0006200 IEA ATP catabolic process
GO:0008152 IEA metabolic process
GO:0010923 ISS negative regulation of phosphatase activity
GO:0030673 IEA axolemma
GO:0030898 ISS actin-dependent ATPase activity
GO:0048306 IEA calcium-dependent protein binding
GO:0051015 ISS actin filament binding
GO:0061502 ISS early endosome to recycling endosome transport
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036863 MYO1D myosin ID protein_coding Danio_rerio
ENSG00000176658 MYO1D myosin ID protein_coding Homo_sapiens

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