C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005K8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000176658-ENSG00000006042 CGP 9606 17:32492522-32945106
GeneTranscriptPositionBiotype
ENSG00000176658 (MYO1D)
myosin ID 		ENST00000318217 (MYO1D-001) 32492522-32877177 protein_coding
ENST00000394649 (MYO1D-004) 32492609-32863043 protein_coding
ENST00000577252 (MYO1D-008) 32721106-32755518 nonsense_mediated_decay
ENST00000577352 (MYO1D-012) 32494719-32659406 retained_intron
ENST00000577576 (MYO1D-014) 32494453-32497073 processed_transcript
ENST00000579584 (MYO1D-002) 32594203-32877144 protein_coding
ENST00000580538 (MYO1D-007) 32721145-32755719 retained_intron
ENST00000580547 (MYO1D-017) 32594341-32602711 processed_transcript
ENST00000581059 (MYO1D-011) 32638775-32659451 processed_transcript
ENST00000582217 (MYO1D-016) 32653864-32684284 processed_transcript
ENST00000582751 (MYO1D-006) 32738358-32756262 processed_transcript
ENST00000583611 (MYO1D-009) 32734725-32749005 processed_transcript
ENST00000583621 (MYO1D-003) 32759812-32877177 protein_coding
ENST00000584232 (MYO1D-015) 32727587-32760396 processed_transcript
ENST00000585094 (MYO1D-010) 32658979-32721135 retained_intron
ENST00000623444 (MYO1D-013) 32658522-32659142 TEC
ENSG00000236377 (AC084809.3)
 ENST00000444464 (AC084809.3-001) 32905662-32906584 lincRNA
ENSG00000263717 (RP11-466A19.6)
 ENST00000583156 (RP11-466A19.6-001) 32512869-32519350 sense_intronic
ENSG00000264458 (RP11-220C2.1)
 ENST00000582272 (RP11-220C2.1-001) 32627739-32686484 antisense
ENSG00000265222 (RP11-466A19.8)
 ENST00000578408 (RP11-466A19.8-001) 32509954-32523424 sense_intronic
ENSG00000265337 (RP11-466A19.5)
 ENST00000577227 (RP11-466A19.5-001) 32529008-32530049 sense_intronic
ENSG00000266599 (RP11-466A19.3)
 ENST00000584219 (RP11-466A19.3-001) 32518953-32531492 antisense
ENSG00000266718 (RP11-466A19.1)
 ENST00000581360 (RP11-466A19.1-001) 32495536-32499333 antisense
ENSG00000279781 (RP11-466A19.7)
 ENST00000624836 (RP11-466A19.7-001) 32518322-32518934 TEC
ENSG00000280245 (RP11-466A19.4)
 ENST00000623428 (RP11-466A19.4-001) 32504567-32505644 TEC
CIL_0005K8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035441-ENSMUSG00000035413 CGP 10090 11:80482126-80822033
GeneTranscriptPositionBiotype
ENSMUSG00000035413 (Tmem98)
transmembrane protein 98 		ENSMUST00000040865 (Tmem98-001) 80810175-80822033 protein_coding
ENSMUSG00000035441 (Myo1d)
myosin ID 		ENSMUST00000041065 (Myo1d-001) 80482126-80780025 protein_coding
ENSMUST00000070997 (Myo1d-002) 80583827-80780025 protein_coding
ENSMUST00000125944 (Myo1d-003) 80673667-80780003 retained_intron
ENSMUSG00000085078 (C030013C21Rik)
RIKEN cDNA C030013C21 gene 		ENSMUST00000133400 (C030013C21Rik-001) 80507410-80509106 sense_intronic

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005K8_0001ENSG00000176658ENST00000318217ENST00000394649ENST00000577252ENST00000577352ENST00000577576ENST00000579584ENST00000580538ENST00000580547ENST00000581059ENST00000582217ENST00000582751ENST00000583611ENST00000583621ENST00000584232ENST00000585094ENST00000623444ENSG00000236377ENST00000444464ENSG00000263717ENST00000583156ENSG00000264458ENST00000582272ENSG00000265222ENST00000578408ENSG00000265337ENST00000577227ENSG00000266599ENST00000584219ENSG00000266718ENST00000581360ENSG00000279781ENST00000624836ENSG00000280245ENST00000623428CIL_0005K8_0002ENSMUSG00000035413ENSMUST00000040865ENSMUSG00000035441ENSMUST00000041065ENSMUST00000070997ENSMUST00000125944ENSMUSG00000085078ENSMUST00000133400
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005K8_0001ENSG00000176658ENST00000318217ENST00000577252ENST00000579584ENST00000580547ENST00000581059ENST00000583621ENST00000585094ENSG00000236377ENST00000444464ENSG00000263717ENST00000583156ENSG00000264458ENST00000582272ENSG00000265222ENST00000578408ENSG00000265337ENST00000577227ENSG00000266599ENST00000584219ENSG00000266718ENST00000581360ENSG00000279781ENST00000624836ENSG00000280245ENST00000623428CIL_0005K8_0002ENSMUSG00000035413ENSMUST00000040865ENSMUSG00000035441ENSMUST00000041065ENSMUSG00000085078ENSMUST00000133400
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000176658 ENST00000318217 26.326±0.00 7.600±0.00 1.317±0.00 3.128±1.80 4.342±0.26 9.440±1.75 1.804±0.00 5.561±4.33 1.606±0.18 5.916±3.98 1.278±1.19 7.449±3.71 6.502±2.55 8.946±7.19
ENST00000394649 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577252 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.384±0.00 N/A N/A N/A
ENST00000577352 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579584 N/A N/A 0.756±0.00 1.149±0.44 6.920±0.00 7.008±0.00 0.357±0.00 1.148±0.00 2.007±0.00 3.353±0.00 N/A 5.441±0.00 N/A 2.120±0.00
ENST00000580538 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.727±0.00
ENST00000581059 N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.515±0.00 N/A N/A N/A N/A
ENST00000582217 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582751 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583621 N/A N/A N/A 1.441±0.00 9.876±0.00 N/A 1.179±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000584232 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585094 N/A N/A N/A N/A N/A 32.292±0.00 N/A N/A N/A N/A N/A N/A 9.907±0.00 8.098±0.00
ENST00000623444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000236377 ENST00000444464 N/A 0.092±0.00 N/A 0.226±0.03 0.031±0.00 N/A 0.056±0.00 N/A N/A N/A N/A 0.328±0.00 0.093±0.04 0.365±0.00
ENSG00000263717 ENST00000583156 N/A 0.227±0.00 N/A N/A N/A 0.699±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000264458 ENST00000582272 0.084±0.00 N/A N/A N/A N/A N/A 0.197±0.00 N/A N/A N/A N/A 0.093±0.03 N/A 0.053±0.01
ENSG00000265222 ENST00000578408 N/A 0.065±0.00 N/A 0.121±0.00 0.134±0.08 0.205±0.17 N/A 0.066±0.00 N/A 0.077±0.00 N/A 0.121±0.07 N/A 0.070±0.03
ENSG00000265337 ENST00000577227 N/A N/A 0.192±0.00 N/A 0.945±0.00 1.786±0.00 N/A N/A N/A N/A N/A 0.115±0.00 N/A 0.114±0.00
ENSG00000266599 ENST00000584219 N/A N/A N/A 0.054±0.00 1.671±0.00 N/A 0.139±0.00 N/A N/A N/A N/A 0.172±0.11 N/A 0.970±0.56
ENSG00000266718 ENST00000581360 0.070±0.00 0.293±0.00 0.174±0.00 0.256±0.15 0.200±0.02 0.117±0.02 0.100±0.01 0.162±0.03 0.088±0.01 0.184±0.00 0.106±0.00 0.172±0.01 0.027±0.00 0.188±0.08
ENSG00000279781 ENST00000624836 N/A N/A N/A 0.026±0.00 0.170±0.00 N/A N/A 0.220±0.00 N/A N/A N/A 0.142±0.06 0.217±0.00 0.365±0.23
ENSG00000280245 ENST00000623428 N/A N/A N/A 0.059±0.02 0.566±0.51 1.003±0.00 0.053±0.00 0.019±0.00 0.178±0.00 0.254±0.00 N/A 0.158±0.09 N/A 0.051±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035413 ENSMUST00000040865 29.399±2.53 50.498±7.26 30.892±6.39 9.261±4.70 12.735±2.42 80.050±5.84 13.168±0.89 11.518±1.10 8.763±3.33 35.948±0.90 0.536±0.10 47.313±13.66 6.095±3.90 1.773±0.88
ENSMUSG00000035441 ENSMUST00000041065 7.435±1.78 22.702±9.54 13.419±2.39 1.437±1.35 4.205±1.49 68.669±5.57 2.922±0.17 17.772±2.08 3.529±0.51 39.248±1.37 0.991±0.14 12.272±3.41 17.373±6.26 1.984±0.48
ENSMUST00000070997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125944 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085078 ENSMUST00000133400 0.066±0.00 0.176±0.06 0.080±0.00 0.139±0.00 0.329±0.23 0.285±0.17 0.091±0.00 0.163±0.05 0.014±0.00 0.174±0.07 0.090±0.00 0.208±0.20 0.150±0.14 3.809±1.05

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