C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin ID
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000041065 Myo1d-001 ENSMUSG00000035441 10090 - 11:80482126-80780025 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041065
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041065 7.435±1.78 22.702±9.54 13.419±2.39 1.437±1.35 4.205±1.49 68.669±5.57 2.922±0.17 17.772±2.08 3.529±0.51 39.248±1.37 0.991±0.14 12.272±3.41 17.373±6.26 1.984±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005RL CIL_0005RL_0003 CGP 11:80477023-80780025
CIL_0005K8 CIL_0005K8_0002 CGP 11:80482126-80822033

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000146 IEA microfilament motor activity
GO:0005516 IEA calmodulin binding
GO:0005524 IEA ATP binding
GO:0005768 ISS endosome
GO:0005790 IEA smooth endoplasmic reticulum
GO:0006200 IEA ATP catabolic process
GO:0008152 IEA metabolic process
GO:0010923 ISS negative regulation of phosphatase activity
GO:0030673 IEA axolemma
GO:0030898 ISS actin-dependent ATPase activity
GO:0048306 IEA calcium-dependent protein binding
GO:0051015 ISS actin filament binding
GO:0061502 ISS early endosome to recycling endosome transport
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000067762 MYO1D-001 protein_coding Danio_rerio 0 1146
ENST00000318217 MYO1D-001 protein_coding Homo_sapiens 0 4004
ENST00000394649 MYO1D-004 protein_coding Homo_sapiens 0 3843
ENST00000577252 MYO1D-008 nonsense_mediated_decay Homo_sapiens 0 396
ENST00000577352 MYO1D-012 retained_intron Homo_sapiens 0 1279
ENST00000577576 MYO1D-014 processed_transcript Homo_sapiens 0 241
ENST00000579584 MYO1D-002 protein_coding Homo_sapiens 0 3766
ENST00000580538 MYO1D-007 retained_intron Homo_sapiens 0 638
ENST00000581059 MYO1D-011 processed_transcript Homo_sapiens 0 695
ENST00000582217 MYO1D-016 processed_transcript Homo_sapiens 0 575
ENST00000582751 MYO1D-006 processed_transcript Homo_sapiens 0 446
ENST00000583611 MYO1D-009 processed_transcript Homo_sapiens 0 385
ENST00000583621 MYO1D-003 protein_coding Homo_sapiens 0 1672
ENST00000584232 MYO1D-015 processed_transcript Homo_sapiens 0 704
ENST00000585094 MYO1D-010 retained_intron Homo_sapiens 0 708

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