C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035472 Slc25a21 10090 - 12:56712634-57197472 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000044634 Slc25a21-001 56712634-57197472 protein_coding
  ENSMUST00000110680 Slc25a21-201 56713813-57159244 protein_coding
  ENSMUST00000160709 Slc25a21-002 56727127-56775360 processed_transcript
  ENSMUST00000160892 Slc25a21-003 56773512-56980393 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000044634ENSMUST00000110680ENSMUST00000160709
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000044634 0.046±0.03 0.073±0.05 0.180±0.02 0.032±0.02 0.070±0.07 0.128±0.06 0.070±0.00 3.647±1.00 6.412±3.89 0.008±0.00 0.193±0.17 0.592±0.35 0.788±0.29
ENSMUST00000110680 0.043±0.00 N/A 0.159±0.00 0.220±0.00 N/A N/A N/A N/A 1.648±0.00 N/A 0.160±0.05 1.055±0.31 N/A
ENSMUST00000160709 N/A N/A N/A 0.232±0.16 N/A N/A N/A N/A N/A 0.091±0.01 0.066±0.00 0.539±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007LS CIL_0007LS_0003 UCNEbase 12:55566857-57467023
CIL_0008XR CIL_0008XR_0002 VISTA 12:56140796-56741827
CIL_0008R1 CIL_0008R1_0002 VISTA 12:56154748-56756277
CIL_00091S CIL_00091S_0002 VISTA 12:56158078-56760488
CIL_0007TC CIL_0007TC_0002 VISTA 12:56181967-56783344
CIL_0007XY CIL_0007XY_0002 VISTA 12:56220183-56821029
CIL_00045C CIL_00045C_0002 CGP 12:56611389-56712822
CIL_0000OF CIL_0000OF_0002 CGP 12:56691767-57197472

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0006810 IEA transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060564 slc25a21 solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21 protein_coding Danio_rerio
ENSG00000183032 SLC25A21 solute carrier family 25 (mitochondrial oxoadipate carrier), member 21 protein_coding Homo_sapiens

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