C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00045C_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000136327-ENSG00000198807 CGP 9606 14:36580579-36679715
GeneTranscriptPositionBiotype
ENSG00000136327 (NKX2-8)
NK2 homeobox 8 		ENST00000258829 (NKX2-8-001) 36580579-36582607 protein_coding
ENSG00000183032 (SLC25A21)
solute carrier family 25 (mitochondrial oxoadipate carrier), member 21 		ENST00000331299 (SLC25A21-001) 36679289-37172866 protein_coding
ENST00000546428 (SLC25A21-002) 36725153-36759718 retained_intron
ENST00000555449 (SLC25A21-004) 36678431-37172423 protein_coding
ENST00000556444 (SLC25A21-003) 36711317-36725679 retained_intron
ENST00000557611 (SLC25A21-005) 36870475-37172346 processed_transcript
ENST00000622765 (SLC25A21-201) 36677921-36875009 protein_coding
ENSG00000198807 (PAX9)
paired box 9 		ENST00000361487 (PAX9-001) 36661865-36679715 protein_coding
ENST00000402703 (PAX9-201) 36657568-36677804 protein_coding
ENST00000553267 (PAX9-004) 36657568-36662008 processed_transcript
ENST00000554201 (PAX9-002) 36662574-36676406 protein_coding
ENST00000555639 (PAX9-005) 36657671-36663143 processed_transcript
ENST00000557107 (PAX9-003) 36665990-36676355 processed_transcript
ENSG00000201395 (RN7SKP257)
RNA, 7SK small nuclear pseudogene 257 		ENST00000364525 (RN7SKP257-201) 36593839-36594147 misc_RNA
ENSG00000258661 (RP11-964E11.2)
 ENST00000555107 (RP11-964E11.2-001) 36647083-36658801 antisense

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00045C_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000058669-ENSMUSG00000001497 CGP 10090 12:56611389-56712822
GeneTranscriptPositionBiotype
ENSMUSG00000001497 (Pax9)
paired box 9 		ENSMUST00000001538 (Pax9-201) 56695639-56712822 protein_coding
ENSMUST00000152848 (Pax9-002) 56695729-56710346 retained_intron
ENSMUST00000153250 (Pax9-001) 56691767-56712707 protein_coding
ENSMUSG00000035472 (Slc25a21)
solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21 		ENSMUST00000044634 (Slc25a21-001) 56712634-57197472 protein_coding
ENSMUST00000110680 (Slc25a21-201) 56713813-57159244 protein_coding
ENSMUST00000160709 (Slc25a21-002) 56727127-56775360 processed_transcript
ENSMUST00000160892 (Slc25a21-003) 56773512-56980393 retained_intron
ENSMUSG00000058669 (Nkx2-9)
NK2 homeobox 9 		ENSMUST00000072631 (Nkx2-9-001) 56611389-56613284 protein_coding
ENSMUSG00000089894 (Gm15524)
predicted gene 15524 		ENSMUST00000159874 (Gm15524-001) 56689918-56692964 antisense

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00045C_0001ENSG00000136327ENST00000258829ENSG00000183032ENST00000331299ENST00000546428ENST00000555449ENST00000556444ENST00000557611ENST00000622765ENSG00000198807ENST00000361487ENST00000402703ENST00000553267ENST00000554201ENST00000555639ENST00000557107ENSG00000201395ENST00000364525ENSG00000258661ENST00000555107CIL_00045C_0002ENSMUSG00000001497ENSMUST00000001538ENSMUST00000152848ENSMUST00000153250ENSMUSG00000035472ENSMUST00000044634ENSMUST00000110680ENSMUST00000160709ENSMUST00000160892ENSMUSG00000058669ENSMUST00000072631ENSMUSG00000089894ENSMUST00000159874
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00045C_0001ENSG00000136327ENST00000258829ENSG00000183032ENST00000331299ENST00000546428ENST00000555449ENST00000556444ENST00000622765ENSG00000198807ENST00000361487ENST00000402703ENST00000554201ENST00000555639ENSG00000201395ENST00000364525ENSG00000258661ENST00000555107CIL_00045C_0002ENSMUSG00000001497ENSMUST00000001538ENSMUST00000152848ENSMUST00000153250ENSMUSG00000035472ENSMUST00000044634ENSMUST00000110680ENSMUST00000160709ENSMUSG00000058669ENSMUST00000072631ENSMUSG00000089894ENSMUST00000159874
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136327 ENST00000258829 N/A N/A N/A 0.098±0.00 0.041±0.00 N/A N/A N/A N/A 0.739±0.00 N/A 0.110±0.02 N/A 2.845±0.90
ENSG00000183032 ENST00000331299 N/A N/A N/A 0.054±0.00 N/A N/A 0.090±0.00 N/A 0.232±0.00 N/A N/A N/A N/A 0.783±0.03
ENST00000546428 0.980±0.00 1.370±0.00 N/A N/A N/A N/A N/A 1.209±0.00 0.433±0.00 N/A N/A N/A 0.221±0.00 4.306±0.00
ENST00000555449 N/A N/A N/A N/A N/A N/A 0.213±0.00 N/A N/A N/A 0.186±0.00 N/A N/A N/A
ENST00000556444 N/A N/A N/A N/A 0.993±0.00 2.544±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622765 N/A 0.116±0.00 0.198±0.00 0.131±0.00 0.119±0.00 0.194±0.04 0.091±0.00 0.081±0.00 N/A 0.273±0.00 N/A 0.309±0.11 0.048±0.00 0.315±0.07
ENSG00000198807 ENST00000361487 N/A N/A N/A 0.028±0.00 N/A N/A N/A N/A N/A 0.116±0.00 N/A N/A N/A N/A
ENST00000402703 N/A N/A N/A N/A 0.158±0.00 N/A N/A N/A 0.233±0.00 0.859±0.51 0.032±0.00 1.446±1.30 0.047±0.00 N/A
ENST00000553267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554201 N/A N/A N/A N/A N/A 0.258±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555639 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.602±0.00 N/A N/A
ENST00000557107 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000201395 ENST00000364525 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.862±0.00 N/A N/A N/A N/A
ENSG00000258661 ENST00000555107 N/A N/A N/A N/A N/A 0.015±0.00 N/A N/A N/A 0.014±0.00 N/A 0.057±0.04 N/A 0.183±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001497 ENSMUST00000001538 0.008±0.00 0.014±0.00 N/A 0.024±0.01 0.023±0.00 0.096±0.02 0.099±0.08 N/A N/A 1.152±1.01 0.011±0.00 0.006±0.00 0.101±0.01 0.429±0.00
ENSMUST00000152848 N/A 0.016±0.00 N/A 0.028±0.00 0.042±0.03 0.026±0.01 0.055±0.01 N/A N/A 2.308±2.15 0.021±0.01 0.044±0.02 N/A 2.945±0.80
ENSMUST00000153250 N/A N/A N/A N/A N/A N/A 0.007±0.00 N/A N/A 0.096±0.00 0.011±0.00 0.008±0.00 N/A N/A
ENSMUSG00000035472 ENSMUST00000044634 0.046±0.03 0.073±0.05 0.180±0.02 0.032±0.02 0.070±0.07 0.128±0.06 0.070±0.00 3.647±1.00 6.412±3.89 N/A 0.008±0.00 0.193±0.17 0.592±0.35 0.788±0.29
ENSMUST00000110680 0.043±0.00 N/A 0.159±0.00 0.220±0.00 N/A N/A N/A N/A 1.648±0.00 N/A N/A 0.160±0.05 1.055±0.31 N/A
ENSMUST00000160709 N/A N/A N/A 0.232±0.16 N/A N/A N/A N/A N/A N/A 0.091±0.01 0.066±0.00 0.539±0.00 N/A
ENSMUST00000160892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000058669 ENSMUST00000072631 0.079±0.08 0.214±0.11 0.024±0.02 0.104±0.05 N/A 0.060±0.02 0.063±0.03 N/A 0.037±0.02 N/A N/A 0.159±0.07 0.044±0.01 0.108±0.07
ENSMUSG00000089894 ENSMUST00000159874 N/A N/A N/A N/A N/A N/A N/A 0.097±0.00 0.121±0.00 0.255±0.16 N/A N/A N/A N/A

Loading