C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00045C_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000136327-ENSG00000198807 CGP 9606 14:36580579-36679715
GeneTranscriptPositionBiotype
ENSG00000136327 (NKX2-8)
NK2 homeobox 8 		ENST00000258829 (NKX2-8-001) 36580579-36582607 protein_coding
ENSG00000183032 (SLC25A21)
solute carrier family 25 (mitochondrial oxoadipate carrier), member 21 		ENST00000331299 (SLC25A21-001) 36679289-37172866 protein_coding
ENST00000546428 (SLC25A21-002) 36725153-36759718 retained_intron
ENST00000555449 (SLC25A21-004) 36678431-37172423 protein_coding
ENST00000556444 (SLC25A21-003) 36711317-36725679 retained_intron
ENST00000557611 (SLC25A21-005) 36870475-37172346 processed_transcript
ENST00000622765 (SLC25A21-201) 36677921-36875009 protein_coding
ENSG00000198807 (PAX9)
paired box 9 		ENST00000361487 (PAX9-001) 36661865-36679715 protein_coding
ENST00000402703 (PAX9-201) 36657568-36677804 protein_coding
ENST00000553267 (PAX9-004) 36657568-36662008 processed_transcript
ENST00000554201 (PAX9-002) 36662574-36676406 protein_coding
ENST00000555639 (PAX9-005) 36657671-36663143 processed_transcript
ENST00000557107 (PAX9-003) 36665990-36676355 processed_transcript
ENSG00000201395 (RN7SKP257)
RNA, 7SK small nuclear pseudogene 257 		ENST00000364525 (RN7SKP257-201) 36593839-36594147 misc_RNA
ENSG00000258661 (RP11-964E11.2)
 ENST00000555107 (RP11-964E11.2-001) 36647083-36658801 antisense
CIL_00045C_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000058669-ENSMUSG00000001497 CGP 10090 12:56611389-56712822
GeneTranscriptPositionBiotype
ENSMUSG00000001497 (Pax9)
paired box 9 		ENSMUST00000001538 (Pax9-201) 56695639-56712822 protein_coding
ENSMUST00000152848 (Pax9-002) 56695729-56710346 retained_intron
ENSMUST00000153250 (Pax9-001) 56691767-56712707 protein_coding
ENSMUSG00000035472 (Slc25a21)
solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21 		ENSMUST00000044634 (Slc25a21-001) 56712634-57197472 protein_coding
ENSMUST00000110680 (Slc25a21-201) 56713813-57159244 protein_coding
ENSMUST00000160709 (Slc25a21-002) 56727127-56775360 processed_transcript
ENSMUST00000160892 (Slc25a21-003) 56773512-56980393 retained_intron
ENSMUSG00000058669 (Nkx2-9)
NK2 homeobox 9 		ENSMUST00000072631 (Nkx2-9-001) 56611389-56613284 protein_coding
ENSMUSG00000089894 (Gm15524)
predicted gene 15524 		ENSMUST00000159874 (Gm15524-001) 56689918-56692964 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00045C_0001ENSG00000136327ENST00000258829ENSG00000183032ENST00000331299ENST00000546428ENST00000555449ENST00000556444ENST00000557611ENST00000622765ENSG00000198807ENST00000361487ENST00000402703ENST00000553267ENST00000554201ENST00000555639ENST00000557107ENSG00000201395ENST00000364525ENSG00000258661ENST00000555107CIL_00045C_0002ENSMUSG00000001497ENSMUST00000001538ENSMUST00000152848ENSMUST00000153250ENSMUSG00000035472ENSMUST00000044634ENSMUST00000110680ENSMUST00000160709ENSMUST00000160892ENSMUSG00000058669ENSMUST00000072631ENSMUSG00000089894ENSMUST00000159874
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00045C_0001ENSG00000136327ENST00000258829ENSG00000183032ENST00000331299ENST00000546428ENST00000555449ENST00000556444ENST00000622765ENSG00000198807ENST00000361487ENST00000402703ENST00000554201ENST00000555639ENSG00000201395ENST00000364525ENSG00000258661ENST00000555107CIL_00045C_0002ENSMUSG00000001497ENSMUST00000001538ENSMUST00000152848ENSMUST00000153250ENSMUSG00000035472ENSMUST00000044634ENSMUST00000110680ENSMUST00000160709ENSMUSG00000058669ENSMUST00000072631ENSMUSG00000089894ENSMUST00000159874
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136327 ENST00000258829 N/A N/A N/A 0.098±0.00 0.041±0.00 N/A N/A N/A N/A 0.739±0.00 N/A 0.110±0.02 N/A 2.845±0.90
ENSG00000183032 ENST00000331299 N/A N/A N/A 0.054±0.00 N/A N/A 0.090±0.00 N/A 0.232±0.00 N/A N/A N/A N/A 0.783±0.03
ENST00000546428 0.980±0.00 1.370±0.00 N/A N/A N/A N/A N/A 1.209±0.00 0.433±0.00 N/A N/A N/A 0.221±0.00 4.306±0.00
ENST00000555449 N/A N/A N/A N/A N/A N/A 0.213±0.00 N/A N/A N/A 0.186±0.00 N/A N/A N/A
ENST00000556444 N/A N/A N/A N/A 0.993±0.00 2.544±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622765 N/A 0.116±0.00 0.198±0.00 0.131±0.00 0.119±0.00 0.194±0.04 0.091±0.00 0.081±0.00 N/A 0.273±0.00 N/A 0.309±0.11 0.048±0.00 0.315±0.07
ENSG00000198807 ENST00000361487 N/A N/A N/A 0.028±0.00 N/A N/A N/A N/A N/A 0.116±0.00 N/A N/A N/A N/A
ENST00000402703 N/A N/A N/A N/A 0.158±0.00 N/A N/A N/A 0.233±0.00 0.859±0.51 0.032±0.00 1.446±1.30 0.047±0.00 N/A
ENST00000553267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554201 N/A N/A N/A N/A N/A 0.258±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555639 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.602±0.00 N/A N/A
ENST00000557107 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000201395 ENST00000364525 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.862±0.00 N/A N/A N/A N/A
ENSG00000258661 ENST00000555107 N/A N/A N/A N/A N/A 0.015±0.00 N/A N/A N/A 0.014±0.00 N/A 0.057±0.04 N/A 0.183±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001497 ENSMUST00000001538 0.008±0.00 0.014±0.00 N/A 0.024±0.01 0.023±0.00 0.096±0.02 0.099±0.08 N/A N/A 1.152±1.01 0.011±0.00 0.006±0.00 0.101±0.01 0.429±0.00
ENSMUST00000152848 N/A 0.016±0.00 N/A 0.028±0.00 0.042±0.03 0.026±0.01 0.055±0.01 N/A N/A 2.308±2.15 0.021±0.01 0.044±0.02 N/A 2.945±0.80
ENSMUST00000153250 N/A N/A N/A N/A N/A N/A 0.007±0.00 N/A N/A 0.096±0.00 0.011±0.00 0.008±0.00 N/A N/A
ENSMUSG00000035472 ENSMUST00000044634 0.046±0.03 0.073±0.05 0.180±0.02 0.032±0.02 0.070±0.07 0.128±0.06 0.070±0.00 3.647±1.00 6.412±3.89 N/A 0.008±0.00 0.193±0.17 0.592±0.35 0.788±0.29
ENSMUST00000110680 0.043±0.00 N/A 0.159±0.00 0.220±0.00 N/A N/A N/A N/A 1.648±0.00 N/A N/A 0.160±0.05 1.055±0.31 N/A
ENSMUST00000160709 N/A N/A N/A 0.232±0.16 N/A N/A N/A N/A N/A N/A 0.091±0.01 0.066±0.00 0.539±0.00 N/A
ENSMUST00000160892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000058669 ENSMUST00000072631 0.079±0.08 0.214±0.11 0.024±0.02 0.104±0.05 N/A 0.060±0.02 0.063±0.03 N/A 0.037±0.02 N/A N/A 0.159±0.07 0.044±0.01 0.108±0.07
ENSMUSG00000089894 ENSMUST00000159874 N/A N/A N/A N/A N/A N/A N/A 0.097±0.00 0.121±0.00 0.255±0.16 N/A N/A N/A N/A

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