C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000044634 Slc25a21-001 ENSMUSG00000035472 10090 - 12:56712634-57197472 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000044634
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000044634 0.046±0.03 0.073±0.05 0.180±0.02 0.032±0.02 0.070±0.07 0.128±0.06 0.070±0.00 3.647±1.00 6.412±3.89 0.008±0.00 0.193±0.17 0.592±0.35 0.788±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007LS CIL_0007LS_0003 UCNEbase 12:55566857-57467023
CIL_0008XR CIL_0008XR_0002 VISTA 12:56140796-56741827
CIL_0008R1 CIL_0008R1_0002 VISTA 12:56154748-56756277
CIL_00091S CIL_00091S_0002 VISTA 12:56158078-56760488
CIL_0007TC CIL_0007TC_0002 VISTA 12:56181967-56783344
CIL_0007XY CIL_0007XY_0002 VISTA 12:56220183-56821029
CIL_00045C CIL_00045C_0002 CGP 12:56611389-56712822
CIL_0000OF CIL_0000OF_0002 CGP 12:56691767-57197472

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0006810 IEA transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000331299 SLC25A21-001 protein_coding Homo_sapiens 0 863
ENST00000361487 PAX9-001 protein_coding Homo_sapiens 0 209
ENST00000555449 SLC25A21-004 protein_coding Homo_sapiens 0 854
ENST00000556444 SLC25A21-003 retained_intron Homo_sapiens 0 278
ENST00000557611 SLC25A21-005 processed_transcript Homo_sapiens 1e-24 117
ENST00000622765 SLC25A21-201 protein_coding Homo_sapiens 0 826

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