C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: receptor accessory protein 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000186864 Reep6-201 ENSMUSG00000035504 10090 + 10:80330145-80336440 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000186864
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000186864 2.100±1.03 1.715±0.75 2.838±0.00 2.090±0.02 0.664±0.20 1.425±0.29 44.908±16.00 1.094±0.18 0.793±0.34 1.922±0.00 243.661±61.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066P CIL_00066P_0002 CGP 10:80321283-80336441
CIL_0000ZJ CIL_0000ZJ_0002 CGP 10:80329953-80348412

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005789 IDA endoplasmic reticulum membrane
GO:0016021 IEA integral component of membrane
GO:0032386 IDA regulation of intracellular transport
GO:0044317 IDA rod spherule
GO:0045177 IDA apical part of cell

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000233596 REEP6-001 protein_coding Homo_sapiens 0 451
ENST00000395479 REEP6-003 protein_coding Homo_sapiens 0 307
ENST00000591735 REEP6-002 retained_intron Homo_sapiens 0 392

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