C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calpain 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040971 Capn5-001 ENSMUSG00000035547 10090 - 7:98121559-98178274 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040971
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040971 6.617±3.82 3.634±1.43 15.811±0.81 6.211±2.69 7.162±3.08 20.580±8.30 0.928±0.38 4.650±0.83 5.532±6.20 9.550±0.27 0.263±0.14 14.150±4.71 2.461±2.18 0.387±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001SU CIL_0001SU_0004 CGP 7:98121559-98178274

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004198 IBA calcium-dependent cysteine-type endopeptidase activity
GO:0005737 IBA cytoplasm
GO:0005925 IEA focal adhesion
GO:0006508 IBA proteolysis
GO:0009986 ISS cell surface
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000101732 capn5b-001 protein_coding Danio_rerio 0 713
ENST00000278559 CAPN5-001 protein_coding Homo_sapiens 0 2483
ENST00000456580 CAPN5-004 protein_coding Homo_sapiens 0 2244
ENST00000527066 CAPN5-007 protein_coding Homo_sapiens 0 350
ENST00000527129 CAPN5-005 retained_intron Homo_sapiens 0 863
ENST00000529629 CAPN5-003 protein_coding Homo_sapiens 0 2383
ENST00000533889 CAPN5-009 retained_intron Homo_sapiens 0 527
ENST00000615896 CAPN5-201 protein_coding Homo_sapiens 0 2440

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