C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calpain 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107112 Capn5-002 ENSMUSG00000035547 10090 - 7:98123661-98162342 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonLiverMuscleOvaryPlacentaENSMUST00000107112
Transcript ID Adrenal Brain Breast Colon Liver Muscle Ovary Placenta
ENSMUST00000107112 1.970±0.23 5.127±0.00 4.424±0.28 35.735±11.01 0.380±0.08 0.103±0.00 4.951±1.18 1.099±0.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001SU CIL_0001SU_0004 CGP 7:98121559-98178274

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004198 IBA calcium-dependent cysteine-type endopeptidase activity
GO:0005737 IBA cytoplasm
GO:0006508 IBA proteolysis
GO:0009986 ISS cell surface

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000101732 capn5b-001 protein_coding Danio_rerio 0 713
ENST00000278559 CAPN5-001 protein_coding Homo_sapiens 0 2403
ENST00000456580 CAPN5-004 protein_coding Homo_sapiens 0 2215
ENST00000527066 CAPN5-007 protein_coding Homo_sapiens 0 350
ENST00000527129 CAPN5-005 retained_intron Homo_sapiens 0 833
ENST00000529629 CAPN5-003 protein_coding Homo_sapiens 0 2383
ENST00000533889 CAPN5-009 retained_intron Homo_sapiens 0 527
ENST00000615896 CAPN5-201 protein_coding Homo_sapiens 0 2383

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