C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: keratin 17
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035557 Krt17 10090 - 11:100256217-100261029 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000080893 Krt17-001 100256217-100261029 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000080893
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000080893 1.602±0.09 0.258±0.05 0.986±0.80 17.373±7.18 7.857±0.67 0.311±0.04 0.032±0.02 0.142±0.06 0.270±0.06 0.545±0.24 0.621±0.30 0.316±0.25 0.045±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_0016 CGP 11:100246091-100261029
CIL_00056U CIL_00056U_000X CGP 11:100256217-100269871

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002009 IGI morphogenesis of an epithelium
GO:0005198 IEA structural molecule activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005882 IEA intermediate filament
GO:0007165 IEA signal transduction
GO:0030307 IMP positive regulation of cell growth
GO:0031424 IGI keratinization
GO:0032395 IEA MHC class II receptor activity
GO:0042289 IEA MHC class II protein binding
GO:0045109 IGI intermediate filament organization
GO:0045727 IMP positive regulation of translation
GO:0051798 IMP positive regulation of hair follicle development
GO:0070062 IEA extracellular vesicular exosome
GO:0071944 IDA cell periphery

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000000212 zgc:92061 zgc:92061 protein_coding Danio_rerio
ENSDARG00000014356 zgc:92035 zgc:92035 protein_coding Danio_rerio
ENSDARG00000022334 BX469912.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000023082 krt1-19d keratin, type 1, gene 19d protein_coding Danio_rerio
ENSDARG00000036832 cyt1l type I cytokeratin, enveloping layer, like protein_coding Danio_rerio
ENSDARG00000036834 zgc:109868 zgc:109868 protein_coding Danio_rerio
ENSDARG00000036840 krt15 keratin 15 protein_coding Danio_rerio
ENSDARG00000044975 zgc:153629 zgc:153629 protein_coding Danio_rerio
ENSDARG00000044976 zgc:136902 zgc:136902 protein_coding Danio_rerio
ENSDARG00000090268 si:dkeyp-113d7.4 si:dkeyp-113d7.4 protein_coding Danio_rerio
ENSDARG00000092947 cyt1 type I cytokeratin, enveloping layer protein_coding Danio_rerio
ENSDARG00000094041 krt17 keratin 17 protein_coding Danio_rerio
ENSDARG00000095147 wu:fb17f05 wu:fb17f05 protein_coding Danio_rerio
ENSG00000128422 KRT17 keratin 17 protein_coding Homo_sapiens

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