C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: UTP6, small subunit (SSU) processome component, homolog (yeast)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035575 Utp6 10090 - 11:79932321-79962390 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000043152 Utp6-001 79933953-79962390 protein_coding
  ENSMUST00000108241 Utp6-002 79932321-79962379 protein_coding
  ENSMUST00000131921 Utp6-004 79935850-79942264 retained_intron
  ENSMUST00000146127 Utp6-003 79958597-79962367 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043152ENSMUST00000108241ENSMUST00000131921
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043152 5.919±1.49 2.390±0.72 9.907±0.42 7.081±1.63 3.936±1.43 2.585±0.35 3.698±0.41 5.641±1.04 6.394±3.13 4.092±0.64 9.185±0.35 5.676±3.37 9.627±3.55 1.623±0.32
ENSMUST00000108241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.977±1.34 N/A
ENSMUST00000131921 N/A N/A N/A 10.778±0.00 4.543±0.00 3.706±1.25 N/A N/A 4.454±0.21 N/A N/A 12.028±8.87 21.066±11.65 4.955±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000VR CIL_0000VR_0002 CGP 11:79932321-80034123

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005730 IEA nucleolus
GO:0006364 IEA rRNA processing

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035730 utp6 UTP6, small subunit (SSU) processome component, homolog (yeast) protein_coding Danio_rerio
ENSG00000108651 UTP6 UTP6, small subunit (SSU) processome component, homolog (yeast) protein_coding Homo_sapiens

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