Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	UTP6, small subunit (SSU) processome component, homolog (yeast)
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSMUSG00000035575	Utp6	10090	-	11:79932321-79962390	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENSMUST00000043152		Utp6-001	79933953-79962390	protein_coding
	ENSMUST00000108241		Utp6-002	79932321-79962379	protein_coding
	ENSMUST00000131921		Utp6-004	79935850-79942264	retained_intron
	ENSMUST00000146127		Utp6-003	79958597-79962367	retained_intron
Mus musculus EnsemblGRCm38 Genome Exciting message Genes Gene structures from Ensembl Connecting Transcripts Structures from Ensembl Connecting Powered by Dalliance 0.11.11

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENSMUST00000043152	5.919±1.49	2.390±0.72	9.907±0.42	7.081±1.63	3.936±1.43	2.585±0.35	3.698±0.41	5.641±1.04	6.394±3.13	4.092±0.64	9.185±0.35	5.676±3.37	9.627±3.55	1.623±0.32
ENSMUST00000108241	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	5.977±1.34	N/A
ENSMUST00000131921	N/A	N/A	N/A	10.778±0.00	4.543±0.00	3.706±1.25	N/A	N/A	4.454±0.21	N/A	N/A	12.028±8.87	21.066±11.65	4.955±0.00

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0000VR	CIL_0000VR_0002	CGP	11:79932321-80034123

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0005730	IEA	nucleolus
GO:0006364	IEA	rRNA processing

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000035730	utp6	UTP6, small subunit (SSU) processome component, homolog (yeast)	protein_coding	Danio_rerio
ENSG00000108651	UTP6	UTP6, small subunit (SSU) processome component, homolog (yeast)	protein_coding	Homo_sapiens

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