C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000VR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000108651-ENSG00000178691 CGP 9606 17:31860899-32001045
GeneTranscriptPositionBiotype
ENSG00000108651 (UTP6)
UTP6, small subunit (SSU) processome component, homolog (yeast) 		ENST00000261708 (UTP6-001) 31860899-31901765 protein_coding
ENST00000477128 (UTP6-004) 31863174-31888221 retained_intron
ENST00000477860 (UTP6-003) 31873184-31873844 retained_intron
ENST00000484661 (UTP6-002) 31863349-31873948 retained_intron
ENST00000490218 (UTP6-005) 31884893-31901340 processed_transcript
ENST00000579459 (UTP6-008) 31863174-31868112 protein_coding
ENST00000579878 (UTP6-009) 31892148-31901673 retained_intron
ENST00000581012 (UTP6-007) 31863173-31873395 protein_coding
ENST00000583408 (UTP6-006) 31880181-31901708 retained_intron
ENSG00000178691 (SUZ12)
SUZ12 polycomb repressive complex 2 subunit 		ENST00000322652 (SUZ12-001) 31937018-32001045 protein_coding
ENST00000494429 (SUZ12-003) 31965695-31967589 retained_intron
ENST00000578106 (SUZ12-004) 31994353-31999376 retained_intron
ENST00000580398 (SUZ12-002) 31937067-32000649 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0000VR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035575-ENSMUSG00000017548 CGP 10090 11:79932321-80034123
GeneTranscriptPositionBiotype
ENSMUSG00000017548 (Suz12)
suppressor of zeste 12 homolog (Drosophila) 		ENSMUST00000017692 (Suz12-001) 79993106-80034123 protein_coding
ENSMUST00000126091 (Suz12-002) 79995791-80013587 nonsense_mediated_decay
ENSMUST00000132312 (Suz12-005) 79995586-79999564 retained_intron
ENSMUST00000144188 (Suz12-003) 80025195-80032001 nonsense_mediated_decay
ENSMUST00000148140 (Suz12-004) 79995617-80013657 retained_intron
ENSMUST00000163272 (Suz12-201) 79993106-80034122 protein_coding
ENSMUSG00000035575 (Utp6)
UTP6, small subunit (SSU) processome component, homolog (yeast) 		ENSMUST00000043152 (Utp6-001) 79933953-79962390 protein_coding
ENSMUST00000108241 (Utp6-002) 79932321-79962379 protein_coding
ENSMUST00000131921 (Utp6-004) 79935850-79942264 retained_intron
ENSMUST00000146127 (Utp6-003) 79958597-79962367 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000VR_0001ENSG00000108651ENST00000261708ENST00000477128ENST00000477860ENST00000484661ENST00000490218ENST00000579459ENST00000579878ENST00000581012ENST00000583408ENSG00000178691ENST00000322652ENST00000494429ENST00000578106ENST00000580398CIL_0000VR_0002ENSMUSG00000017548ENSMUST00000017692ENSMUST00000126091ENSMUST00000132312ENSMUST00000144188ENSMUST00000148140ENSMUST00000163272ENSMUSG00000035575ENSMUST00000043152ENSMUST00000108241ENSMUST00000131921ENSMUST00000146127
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000VR_0001ENSG00000108651ENST00000261708ENST00000477128ENST00000484661ENST00000490218ENST00000579878ENST00000581012ENST00000583408ENSG00000178691ENST00000322652ENST00000494429ENST00000578106ENST00000580398CIL_0000VR_0002ENSMUSG00000017548ENSMUST00000017692ENSMUST00000144188ENSMUST00000163272ENSMUSG00000035575ENSMUST00000043152ENSMUST00000108241ENSMUST00000131921
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000108651 ENST00000261708 0.888±0.00 3.625±0.00 N/A 0.698±0.08 1.217±0.37 0.776±0.00 0.531±0.08 2.068±0.00 0.777±0.00 0.716±0.20 N/A 2.275±0.19 1.237±0.14 1.901±0.00
ENST00000477128 N/A 5.152±0.00 N/A 1.471±0.47 1.315±0.00 2.768±1.05 0.756±0.00 2.474±0.00 1.518±0.00 1.431±0.30 4.711±0.00 4.472±1.01 N/A N/A
ENST00000477860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484661 N/A N/A N/A 2.356±0.00 N/A N/A N/A N/A N/A 4.588±1.35 N/A 21.708±13.52 21.063±0.00 36.430±0.00
ENST00000490218 N/A N/A 3.370±0.00 6.547±0.00 6.030±0.00 6.287±0.00 N/A N/A N/A 4.222±0.00 N/A N/A N/A N/A
ENST00000579459 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579878 N/A N/A 9.391±0.00 4.878±0.00 8.908±0.00 4.819±0.00 N/A 11.230±0.00 5.570±0.00 10.569±0.00 6.096±0.00 N/A N/A N/A
ENST00000581012 6.515±0.00 N/A N/A N/A 8.580±0.00 5.660±0.00 2.490±0.00 7.828±0.29 3.718±0.00 4.145±0.00 N/A 31.143±0.00 20.274±0.00 18.570±2.16
ENST00000583408 2.188±0.00 7.105±0.00 4.221±0.00 2.213±0.16 3.008±0.01 3.566±0.69 1.640±0.00 N/A 3.448±1.06 2.688±0.13 5.855±0.00 4.109±0.00 N/A 5.207±0.00
ENSG00000178691 ENST00000322652 3.239±0.00 2.222±0.00 1.235±0.00 2.440±0.71 2.962±0.00 4.196±0.00 1.668±0.96 3.693±0.93 1.866±0.07 5.248±0.00 1.882±0.00 3.720±0.94 2.836±0.53 6.683±2.55
ENST00000494429 N/A N/A N/A N/A 1.492±0.00 1.312±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.779±0.00 6.424±0.00 18.813±0.00
ENST00000580398 1.312±0.00 N/A 0.422±0.00 0.275±0.00 1.440±0.00 1.616±0.00 0.464±0.19 N/A 1.353±0.00 N/A 0.324±0.00 4.618±2.78 7.233±0.00 13.766±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017548 ENSMUST00000017692 3.834±2.37 2.307±0.62 7.623±0.13 7.268±3.78 2.518±1.54 2.556±0.51 1.877±0.91 2.693±0.95 13.800±8.48 4.453±1.19 2.942±0.58 4.861±2.71 15.928±1.71 2.868±1.29
ENSMUST00000126091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144188 N/A N/A N/A 12.369±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 55.164±24.65 N/A
ENSMUST00000148140 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163272 1.593±0.66 N/A 1.639±0.15 5.379±2.13 0.928±0.25 N/A 1.016±0.63 2.756±0.89 3.406±1.35 2.757±0.00 0.506±0.07 5.781±5.86 11.682±10.15 1.822±0.64
ENSMUSG00000035575 ENSMUST00000043152 5.919±1.49 2.390±0.72 9.907±0.42 7.081±1.63 3.936±1.43 2.585±0.35 3.698±0.41 5.641±1.04 6.394±3.13 4.092±0.64 9.185±0.35 5.676±3.37 9.627±3.55 1.623±0.32
ENSMUST00000108241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.977±1.34 N/A
ENSMUST00000131921 N/A N/A N/A 10.778±0.00 4.543±0.00 3.706±1.25 N/A N/A 4.454±0.21 N/A N/A 12.028±8.87 21.066±11.65 4.955±0.00
ENSMUST00000146127 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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