C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UTP6, small subunit (SSU) processome component, homolog (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000043152 Utp6-001 ENSMUSG00000035575 10090 - 11:79933953-79962390 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043152
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043152 5.919±1.49 2.390±0.72 9.907±0.42 7.081±1.63 3.936±1.43 2.585±0.35 3.698±0.41 5.641±1.04 6.394±3.13 4.092±0.64 9.185±0.35 5.676±3.37 9.627±3.55 1.623±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000VR CIL_0000VR_0002 CGP 11:79932321-80034123

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005730 IEA nucleolus
GO:0006364 IEA rRNA processing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261708 UTP6-001 protein_coding Homo_sapiens 0 1847
ENST00000477128 UTP6-004 retained_intron Homo_sapiens 0 1230
ENST00000490218 UTP6-005 processed_transcript Homo_sapiens 0 665
ENST00000560291 RP11-56B16.1-001 processed_pseudogene Homo_sapiens 0 1602
ENST00000579878 UTP6-009 retained_intron Homo_sapiens 0 481
ENST00000583408 UTP6-006 retained_intron Homo_sapiens 0 1059

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