C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: downstream of Stk11
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035640 Dos 10090 - 10:80130451-80140835 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000105369 Dos-001 80130551-80139365 protein_coding
  ENSMUST00000123967 Dos-005 80135158-80139178 nonsense_mediated_decay
  ENSMUST00000127515 Dos-006 80136874-80137594 retained_intron
  ENSMUST00000128465 Dos-004 80136663-80137352 processed_transcript
  ENSMUST00000128488 Dos-008 80136645-80137911 processed_transcript
  ENSMUST00000132317 Dos-011 80133074-80135588 retained_intron
  ENSMUST00000132523 Dos-003 80135118-80139363 nonsense_mediated_decay
  ENSMUST00000136260 Dos-007 80136708-80137647 retained_intron
  ENSMUST00000138776 Dos-010 80137347-80138616 processed_transcript
  ENSMUST00000142853 Dos-013 80137347-80140835 protein_coding
  ENSMUST00000146180 Dos-012 80132536-80134681 retained_intron
  ENSMUST00000147778 Dos-002 80130551-80139365 nonsense_mediated_decay
  ENSMUST00000149242 Dos-009 80135516-80137924 processed_transcript
  ENSMUST00000169546 Dos-201 80130451-80137387 protein_coding
  ENSMUST00000170219 Dos-202 80130451-80137387 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSMUST00000147778ENSMUST00000170219
Transcript ID Brain
ENSMUST00000147778 60.379±3.47
ENSMUST00000170219 29.311±18.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XG CIL_0008XG_0002 VISTA 10:79539861-80142369
CIL_0000QW CIL_0000QW_0002 CGP 10:80057416-80130682
CIL_0005ZG CIL_0005ZG_0003 CGP 10:80115803-80140835
CIL_0000QV CIL_0000QV_0002 CGP 10:80130451-80145818

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071325 C22H19orf26 (1 of 2) chromosome 19 open reading frame 26 protein_coding Danio_rerio
ENSDARG00000089348 C2H19orf26 (2 of 2) chromosome 19 open reading frame 26 protein_coding Danio_rerio
ENSG00000099625 C19orf26 chromosome 19 open reading frame 26 protein_coding Homo_sapiens

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