C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000QW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000064932-ENSG00000118046 CGP 9606 19:1107636-1228435
GeneTranscriptPositionBiotype
ENSG00000064932 (SBNO2)
strawberry notch homolog 2 (Drosophila) 		ENST00000361757 (SBNO2-001) 1107636-1174283 protein_coding
ENST00000438103 (SBNO2-003) 1107637-1132221 protein_coding
ENST00000586109 (SBNO2-015) 1109501-1111062 retained_intron
ENST00000587024 (SBNO2-002) 1107641-1174256 protein_coding
ENST00000587655 (SBNO2-011) 1127710-1169146 protein_coding
ENST00000587673 (SBNO2-014) 1108565-1111605 retained_intron
ENST00000590176 (SBNO2-010) 1127661-1173774 protein_coding
ENST00000590446 (SBNO2-013) 1117396-1120128 retained_intron
ENST00000590998 (SBNO2-012) 1127660-1155136 protein_coding
ENST00000592222 (SBNO2-005) 1115356-1132221 retained_intron
ENSG00000118046 (STK11)
serine/threonine kinase 11 		ENST00000326873 (STK11-001) 1206464-1228435 protein_coding
ENST00000585465 (STK11-003) 1223148-1228095 retained_intron
ENST00000585748 (STK11-007) 1177558-1219386 protein_coding
ENST00000585851 (STK11-004) 1206869-1220617 protein_coding
ENST00000586243 (STK11-201) 1205805-1228094 protein_coding
ENST00000586358 (STK11-005) 1207091-1221958 retained_intron
ENST00000589152 (STK11-002) 1206824-1228012 retained_intron
ENST00000591133 (STK11-006) 1220013-1223104 retained_intron
ENST00000593219 (STK11-009) 1206816-1219357 nonsense_mediated_decay
ENSG00000267736 (HMGB2P1)
high mobility group box 2 pseudogene 1 		ENST00000591146 (HMGB2P1-001) 1203209-1203842 transcribed_processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0000QW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035673-ENSMUSG00000003068 CGP 10090 10:80057416-80130682
GeneTranscriptPositionBiotype
ENSMUSG00000003068 (Stk11)
serine/threonine kinase 11 		ENSMUST00000003152 (Stk11-001) 80115803-80130682 protein_coding
ENSMUST00000105370 (Stk11-003) 80125375-80130675 protein_coding
ENSMUST00000105371 (Stk11-004) 80116347-80130470 nonsense_mediated_decay
ENSMUST00000128992 (Stk11-005) 80116354-80117814 processed_transcript
ENSMUST00000129235 (Stk11-008) 80125375-80126509 retained_intron
ENSMUST00000144108 (Stk11-009) 80126386-80128199 retained_intron
ENSMUST00000144119 (Stk11-007) 80124819-80129975 retained_intron
ENSMUST00000144883 (Stk11-002) 80115803-80130469 nonsense_mediated_decay
ENSMUST00000152592 (Stk11-006) 80126682-80130470 protein_coding
ENSMUSG00000035673 (Sbno2)
strawberry notch homolog 2 (Drosophila) 		ENSMUST00000042771 (Sbno2-201) 80057416-80102698 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000QW_0001ENSG00000064932ENST00000361757ENST00000438103ENST00000586109ENST00000587024ENST00000587655ENST00000587673ENST00000590176ENST00000590446ENST00000590998ENST00000592222ENSG00000118046ENST00000326873ENST00000585465ENST00000585748ENST00000585851ENST00000586243ENST00000586358ENST00000589152ENST00000591133ENST00000593219ENSG00000267736ENST00000591146CIL_0000QW_0002ENSMUSG00000003068ENSMUST00000003152ENSMUST00000105370ENSMUST00000105371ENSMUST00000128992ENSMUST00000129235ENSMUST00000144108ENSMUST00000144119ENSMUST00000144883ENSMUST00000152592ENSMUSG00000035673ENSMUST00000042771
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000QW_0001ENSG00000064932ENST00000361757ENST00000438103ENST00000586109ENST00000587024ENST00000587673ENST00000590446ENST00000592222ENSG00000118046ENST00000326873ENST00000585465ENST00000585851ENST00000586243ENST00000586358ENSG00000267736ENST00000591146CIL_0000QW_0002ENSMUSG00000003068ENSMUST00000003152ENSMUST00000105370ENSMUST00000105371ENSMUST00000144108ENSMUST00000144119ENSMUST00000144883ENSMUST00000152592ENSMUSG00000035673ENSMUST00000042771
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000064932 ENST00000361757 12.546±0.00 18.897±0.00 N/A 3.190±0.00 7.140±0.00 4.004±0.00 0.994±0.92 0.727±0.00 3.407±3.03 1.984±0.00 12.749±0.00 6.970±0.00 7.812±2.04 10.354±1.83
ENST00000438103 2.618±0.00 29.643±0.00 0.295±0.00 1.294±1.05 1.446±0.00 11.802±0.00 1.921±0.00 9.353±0.00 1.189±0.05 33.841±0.00 0.552±0.00 9.350±1.95 5.834±0.83 N/A
ENST00000586109 N/A N/A N/A N/A N/A N/A 0.600±0.00 5.240±0.00 N/A N/A 5.935±0.00 N/A N/A N/A
ENST00000587024 N/A N/A N/A 0.887±0.00 N/A 2.443±2.02 1.759±0.00 4.512±0.00 N/A 11.214±10.72 4.055±0.00 N/A 2.969±0.00 7.900±0.00
ENST00000587655 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587673 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 33.698±0.00 N/A 30.824±0.00
ENST00000590176 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.507±0.00 N/A N/A N/A
ENST00000590998 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592222 N/A N/A 1.835±0.00 0.142±0.00 N/A N/A 0.303±0.00 0.533±0.00 N/A 1.537±0.00 N/A 0.758±0.00 N/A N/A
ENSG00000118046 ENST00000326873 8.948±0.00 8.208±0.00 N/A 4.013±0.86 8.148±0.00 5.934±3.66 3.944±1.22 4.277±2.48 3.160±1.39 2.775±2.18 7.886±5.52 6.880±1.97 11.551±4.75 18.251±0.00
ENST00000585465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.143±0.00 N/A N/A
ENST00000585748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585851 N/A N/A N/A 16.786±0.00 22.323±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586243 22.587±0.00 17.432±0.00 1.838±0.00 6.094±4.16 9.272±7.92 8.233±6.15 19.435±0.00 9.532±7.08 5.114±3.59 12.164±10.61 33.056±26.63 23.442±17.52 18.956±3.48 159.003±98.24
ENST00000586358 N/A N/A N/A N/A N/A N/A N/A N/A 2.027±0.00 2.057±0.00 N/A N/A N/A N/A
ENST00000589152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267736 ENST00000591146 0.022±0.00 0.024±0.00 N/A 0.024±0.00 0.024±0.00 0.082±0.06 N/A 0.024±0.00 N/A N/A 0.022±0.00 0.094±0.04 0.020±0.00 0.248±0.08
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000003068 ENSMUST00000003152 43.592±4.81 N/A 25.706±0.99 23.217±2.47 N/A N/A 28.446±0.00 N/A 29.831±5.22 62.674±10.75 33.696±3.49 26.060±0.00 22.375±3.97 20.851±1.80
ENSMUST00000105370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 33.760±0.00 N/A
ENSMUST00000105371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 30.166±6.75
ENSMUST00000128992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144108 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 97.146±0.00
ENSMUST00000144119 N/A N/A N/A 136.103±0.00 29.179±0.00 N/A N/A N/A N/A N/A N/A 82.617±38.94 150.361±24.73 152.225±0.00
ENSMUST00000144883 N/A N/A N/A N/A N/A N/A N/A N/A 16.751±0.75 N/A N/A 9.747±0.00 N/A 17.959±2.74
ENSMUST00000152592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 108.222±0.00 N/A N/A
ENSMUSG00000035673 ENSMUST00000042771 8.453±1.16 8.637±3.03 10.905±4.18 4.007±1.79 19.535±15.81 25.661±13.36 1.480±0.20 8.406±2.09 3.809±2.32 14.244±7.16 1.355±0.36 13.427±7.57 5.127±2.23 3.017±0.96

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