C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: downstream of Stk11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147778 Dos-002 ENSMUSG00000035640 10090 - 10:80130551-80139365 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSMUST00000147778
Transcript ID Brain
ENSMUST00000147778 60.379±3.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XG CIL_0008XG_0002 VISTA 10:79539861-80142369
CIL_0000QW CIL_0000QW_0002 CGP 10:80057416-80130682
CIL_0005ZG CIL_0005ZG_0003 CGP 10:80115803-80140835
CIL_0000QV CIL_0000QV_0002 CGP 10:80130451-80145818

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000215376 C19orf26-002 nonsense_mediated_decay Homo_sapiens 0 329
ENST00000382477 C19orf26-201 protein_coding Homo_sapiens 0 857
ENST00000589260 C19orf26-004 nonsense_mediated_decay Homo_sapiens 0 327
ENST00000590083 C19orf26-001 protein_coding Homo_sapiens 0 676
ENST00000591127 C19orf26-003 nonsense_mediated_decay Homo_sapiens 0 403

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