C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, CCHC domain containing 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035649 Zcchc7 10090 + 4:44755877-44932215 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000067521 Zcchc7-004 44760444-44912059 retained_intron
  ENSMUST00000107823 Zcchc7-009 44907202-44931362 processed_transcript
  ENSMUST00000107824 Zcchc7-003 44756568-44932203 protein_coding
  ENSMUST00000126968 Zcchc7-002 44925995-44931362 nonsense_mediated_decay
  ENSMUST00000142714 Zcchc7-006 44756647-44909816 nonsense_mediated_decay
  ENSMUST00000143385 Zcchc7-008 44756639-44762228 protein_coding
  ENSMUST00000144436 Zcchc7-005 44756588-44910997 retained_intron
  ENSMUST00000147272 Zcchc7-001 44923118-44932215 protein_coding
  ENSMUST00000154121 Zcchc7-007 44755877-44761971 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000107823ENSMUST00000107824ENSMUST00000147272
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000107823 N/A N/A N/A 43.568±0.00 N/A N/A N/A N/A N/A N/A N/A 87.331±0.00 33.034±7.64 102.191±0.00
ENSMUST00000107824 2.404±0.94 N/A 6.395±1.03 4.197±1.05 2.560±0.00 1.495±0.04 1.353±0.26 1.932±0.41 3.014±1.68 2.954±0.55 1.844±0.34 4.105±2.22 6.155±1.65 8.205±1.08
ENSMUST00000147272 6.754±2.85 7.378±0.34 8.348±0.75 5.947±0.93 8.375±2.32 4.123±1.85 2.547±0.29 2.732±0.61 1.842±0.47 7.136±0.43 3.737±0.64 8.661±1.94 1.566±0.87 4.423±2.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000843 CIL_000843_0002 VISTA 4:44530265-45131018
CIL_0006K7 CIL_0006K7_0002 CGP 4:44531145-44932215
CIL_0008YP CIL_0008YP_0002 VISTA 4:44551630-45152605
CIL_00080S CIL_00080S_0002 VISTA 4:44617363-45218981
CIL_0007LK CIL_0007LK_0002 UCNEbase 4:44656884-44921390
CIL_00035L CIL_00035L_0002 CGP 4:44755877-44990734

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055443 zcchc7 zinc finger, CCHC domain containing 7 protein_coding Danio_rerio
ENSG00000147905 ZCCHC7 zinc finger, CCHC domain containing 7 protein_coding Homo_sapiens

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