C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, CCHC domain containing 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107824 Zcchc7-003 ENSMUSG00000035649 10090 + 4:44756568-44932203 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000107824
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000107824 2.404±0.94 6.395±1.03 4.197±1.05 2.560±0.00 1.495±0.04 1.353±0.26 1.932±0.41 3.014±1.68 2.954±0.55 1.844±0.34 4.105±2.22 6.155±1.65 8.205±1.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000843 CIL_000843_0002 VISTA 4:44530265-45131018
CIL_0006K7 CIL_0006K7_0002 CGP 4:44531145-44932215
CIL_0008YP CIL_0008YP_0002 VISTA 4:44551630-45152605
CIL_00080S CIL_00080S_0002 VISTA 4:44617363-45218981
CIL_0007LK CIL_0007LK_0002 UCNEbase 4:44656884-44921390
CIL_00035L CIL_00035L_0002 CGP 4:44755877-44990734

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000322831 ZCCHC7-001 protein_coding Homo_sapiens 0 560
ENST00000336755 ZCCHC7-003 protein_coding Homo_sapiens 0 1192
ENST00000461038 ZCCHC7-004 processed_transcript Homo_sapiens 0 1074
ENST00000463625 ZCCHC7-006 processed_transcript Homo_sapiens 0 435
ENST00000481507 ZCCHC7-008 processed_transcript Homo_sapiens 0 316
ENST00000488607 ZCCHC7-002 processed_transcript Homo_sapiens 0 484
ENST00000496099 ZCCHC7-009 processed_transcript Homo_sapiens 0 305
ENST00000497924 ZCCHC7-007 processed_transcript Homo_sapiens 0 305
ENST00000534928 ZCCHC7-201 protein_coding Homo_sapiens 0 1074
ENST00000556703 RP11-613G13.1-001 processed_pseudogene Homo_sapiens 0 741

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