C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glutamate receptor, ionotropic, NMDA3B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035745 Grin3b 10090 + 10:79970715-79977190 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000045085 Grin3b-001 79970715-79977190 protein_coding
  ENSMUST00000131816 Grin3b-002 79974409-79977124 protein_coding
  ENSMUST00000149148 Grin3b-003 79973737-79976715 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000149148
Transcript ID Testis
ENSMUST00000149148 2.259±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XG CIL_0008XG_0002 VISTA 10:79539861-80142369
CIL_0005ZM CIL_0005ZM_0003 CGP 10:79960152-79977190
CIL_0005ZF CIL_0005ZF_0003 CGP 10:79970715-79984330

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004972 IBA N-methyl-D-aspartate selective glutamate receptor activity
GO:0005234 IBA extracellular-glutamate-gated ion channel activity
GO:0005262 IMP calcium channel activity
GO:0017146 IMP N-methyl-D-aspartate selective glutamate receptor complex
GO:0030054 IEA cell junction
GO:0030425 IBA dendrite
GO:0034220 IBA ion transmembrane transport
GO:0035235 IBA ionotropic glutamate receptor signaling pathway
GO:0035249 IBA synaptic transmission, glutamatergic
GO:0043025 IDA neuronal cell body
GO:0045211 IBA postsynaptic membrane
GO:0051205 IMP protein insertion into membrane
GO:0051924 IMP regulation of calcium ion transport
GO:0070588 IMP calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005364 grin3b glutamate receptor, ionotropic, N-methyl-D-aspartate 3B protein_coding Danio_rerio
ENSDARG00000074647 GRIN3B (2 of 2) glutamate receptor, ionotropic, N-methyl-D-aspartate 3B protein_coding Danio_rerio
ENSG00000116032 GRIN3B glutamate receptor, ionotropic, N-methyl-D-aspartate 3B protein_coding Homo_sapiens

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