C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005ZF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000074647-ENSDARG00000060442 CGP 7955 11:14257599-14343176
GeneTranscriptPositionBiotype
ENSDARG00000060442 (tmem259)
transmembrane protein 259 		ENSDART00000085158 (tmem259-001) 14313827-14343176 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0005ZF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000116032-ENSG00000182087 CGP 9606 19:1000419-1021179
GeneTranscriptPositionBiotype
ENSG00000182087 (TMEM259)
transmembrane protein 259 		ENST00000333175 (TMEM259-002) 1009651-1021115 protein_coding
ENST00000356663 (TMEM259-001) 1009648-1021179 protein_coding
ENST00000586250 (TMEM259-007) 1012113-1014304 protein_coding
ENST00000586285 (TMEM259-014) 1010695-1011992 protein_coding
ENST00000586704 (TMEM259-009) 1009653-1020851 retained_intron
ENST00000589055 (TMEM259-013) 1011866-1014247 retained_intron
ENST00000589831 (TMEM259-010) 1012541-1013639 retained_intron
ENST00000592052 (TMEM259-011) 1009720-1011356 retained_intron
ENST00000592590 (TMEM259-008) 1009650-1017420 protein_coding
ENST00000592618 (TMEM259-012) 1009652-1012289 retained_intron
ENST00000593068 (TMEM259-003) 1009648-1013242 nonsense_mediated_decay
ENST00000607316 (TMEM259-005) 1011852-1013342 retained_intron
ENSG00000266990 (LLNLR-284B4.2)
 ENST00000588380 (LLNLR-284B4.2-001) 999796-1002757 antisense
ENSG00000274177 (LLNLR-284B4.1)
 ENST00000610701 (LLNLR-284B4.1-001) 1010221-1010907 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0005ZF_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035745-ENSMUSG00000013858 CGP 10090 10:79970715-79984330
GeneTranscriptPositionBiotype
ENSMUSG00000013858 (Tmem259)
transmembrane protein 259 		ENSMUST00000052885 (Tmem259-001) 79977118-79984330 protein_coding
ENSMUST00000124536 (Tmem259-002) 79977358-79984040 protein_coding
ENSMUST00000124889 (Tmem259-005) 79977963-79978776 retained_intron
ENSMUST00000126383 (Tmem259-003) 79975890-79978940 retained_intron
ENSMUST00000132080 (Tmem259-004) 79974948-79978773 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005ZF_0001ENSDARG00000060442ENSDART00000085158CIL_0005ZF_0002ENSG00000182087ENST00000333175ENST00000356663ENST00000586250ENST00000586285ENST00000586704ENST00000589055ENST00000589831ENST00000592052ENST00000592590ENST00000592618ENST00000593068ENST00000607316ENSG00000266990ENST00000588380ENSG00000274177ENST00000610701CIL_0005ZF_0003ENSMUSG00000013858ENSMUST00000052885ENSMUST00000124536ENSMUST00000124889ENSMUST00000126383ENSMUST00000132080
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005ZF_0001ENSDARG00000060442ENSDART00000085158CIL_0005ZF_0002ENSG00000182087ENST00000333175ENST00000356663ENST00000586285ENST00000586704ENST00000592052ENST00000592590ENST00000593068ENSG00000266990ENST00000588380ENSG00000274177ENST00000610701CIL_0005ZF_0003ENSMUSG00000013858ENSMUST00000052885ENSMUST00000124536
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000060442 ENSDART00000085158 N/A N/A N/A 6.897±2.23 N/A N/A 3.455±1.51 2.800±1.72 1.701±0.00 N/A 3.007±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000182087 ENST00000333175 N/A N/A 1.778±0.00 12.283±0.00 N/A 11.039±0.00 6.030±0.00 N/A 0.880±0.00 10.093±6.76 4.477±0.00 21.255±0.00 34.200±0.00 46.045±0.00
ENST00000356663 23.260±0.00 24.300±0.00 2.724±0.00 10.535±5.41 13.050±9.71 8.382±4.43 9.026±6.66 33.338±19.79 16.155±12.75 29.931±0.00 12.124±8.70 28.911±22.97 38.436±19.54 27.215±5.76
ENST00000586250 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 51.907±0.00 N/A N/A
ENST00000586704 N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.664±0.00 N/A N/A N/A N/A
ENST00000589055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592052 N/A N/A N/A N/A 18.670±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.398±0.00 19.015±0.00
ENST00000592618 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593068 18.389±0.00 23.556±0.00 N/A N/A 14.910±0.00 10.767±0.00 N/A N/A N/A N/A N/A N/A N/A 24.834±0.00
ENST00000607316 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000266990 ENST00000588380 0.261±0.00 0.897±0.00 N/A 0.579±0.00 0.412±0.23 0.273±0.00 0.460±0.00 0.724±0.00 0.286±0.00 0.891±0.00 0.069±0.00 0.359±0.26 N/A 0.778±0.19
ENSG00000274177 ENST00000610701 N/A N/A N/A N/A 67.107±0.00 N/A 34.575±0.00 N/A 65.986±0.00 77.858±0.00 35.225±0.00 N/A 128.371±11.59 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000013858 ENSMUST00000052885 56.061±13.91 108.850±27.56 40.559±3.16 50.343±26.73 63.612±24.00 76.529±3.65 55.531±10.33 74.005±10.16 36.093±5.68 58.461±8.86 25.717±6.79 66.564±30.76 32.789±14.15 55.112±25.11
ENSMUST00000124536 23.673±2.98 89.678±22.26 26.228±1.92 30.755±22.43 48.720±28.13 69.027±12.24 19.052±1.69 32.413±6.06 35.422±11.03 39.672±11.37 8.305±0.66 50.056±16.35 24.921±13.85 20.527±9.26
ENSMUST00000124889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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